Lacticaseibacillus paracasei BD-II: LCBD_1885
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Entry
LCBD_1885 CDS
T01955
Name
(GenBank) hypothetical protein
KO
K06948
30S ribosome assembly GTPase
Organism
lcs
Lacticaseibacillus paracasei BD-II
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcs03009
]
LCBD_1885
Ribosome biogenesis [BR:
lcs03009
]
Prokaryotic type
GTPases
LCBD_1885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YqeH-like_C
MMR_HSR1
RsgA_GTPase
GTP_EFTU
FeoB_N
Dynamin_N
MeaB
AAA_16
Ras
MobB
AAA_22
RNA_helicase
TniB
ANCHR-like_BBOX
Motif
Other DBs
NCBI-ProteinID:
AEA57381
UniProt:
A0A243PVH5
LinkDB
All DBs
Position
complement(1839460..1840584)
Genome browser
AA seq
374 aa
AA seq
DB search
MDTTNTETERRCIGCGAILQTTDPKKPGYLPKATLSKADPDDEIYCQRCFRLRHYNEIAP
VTLTDDDFLRLLNAIGESNALIVNVIDIFDFNGSVIPGLHRFVGDNPVILVGNKADVLPK
SLNPNRLKNWLQQQAKAQGLRPVATMLASAKKGFGVDELLDAIEKYRDHRDVYVVGVTNT
GKSTLINRIIKELTGVEDLITTSRFPGTTLDRIMIPLDDGQSLIDTPGIIHRHQMAHFVG
PKDLKLVSPTSVIKPATYQLNEGQTIFLGGLARFDYLRGGRNSFVIYTDNQLTLHRTKLE
NADDFYQKHVGGLLSPPQPDEVPDFPPLVRFEFTPKEKADLVFAGLGWITVPAGVTVAGY
APKGVDVLLRRAFI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggataccacgaacactgaaacagagcgccgttgcataggctgcggcgctattttgcaa
acaactgatcccaaaaagccgggatacttgccaaaagctactttaagcaaggccgatcct
gatgacgagatttattgccagcgctgttttcggttgcggcactacaacgaaattgcgccg
gtgacgttgacggacgatgattttttacgcttgttgaatgccatcggtgaaagtaatgcg
ttgattgtcaacgtcatcgatatttttgatttcaatggcagtgtcatccctggactgcat
cgttttgtgggtgacaacccagtcattcttgtcgggaacaaagccgatgtgttgccgaag
tcgcttaacccgaatcgattgaagaattggttgcagcagcaggcaaaggcacaagggttg
cgtccggtagccacgatgctggccagcgctaaaaaaggttttggcgttgatgagctgttg
gatgcaattgaaaaatatcgtgatcatcgagacgtttatgtggtcggcgtgacgaacact
ggtaaatctactttgatcaatcgaattataaaagaattgactggcgttgaggatttgatt
accacgtcgcgttttccgggaacgacgttggatcgcattatgatcccgctggatgatggc
caatcattgattgatacaccagggatcattcatcggcatcagatggcacactttgtcggc
cctaaagacttaaaattagtctcaccgacttccgtcatcaagccagcaacctatcaattg
aatgaaggccaaactatttttcttggcggtttagcgcgatttgattaccttcgcggaggt
cgcaacagtttcgttatttacactgataatcagttgacactgcatcgcaccaagttagaa
aatgcggatgatttctatcagaagcatgtgggcggtttactgtcaccaccacagccggat
gaagtgccagactttccgccattggttcggtttgaattcaccccaaaggaaaaagccgac
ttagttttcgccgggttaggctggatcactgtgcctgctggtgttacggttgccggctat
gcgccaaaaggtgtggatgttttgttacggcgtgcgttcatttag
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