Lacticaseibacillus paracasei BD-II: LCBD_2078
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Entry
LCBD_2078 CDS
T01955
Name
(GenBank) hypothetical protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs01501
beta-Lactam resistance
lcs02010
ABC transporters
lcs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCBD_2078
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCBD_2078
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LCBD_2078
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcs02000
]
LCBD_2078
Transporters [BR:
lcs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LCBD_2078
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
DUF5300
AAA_16
AAA_29
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AEA57574
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All DBs
Position
complement(2028766..2029929)
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AA seq
387 aa
AA seq
DB search
MIYFYMKSKWLAALLPQNAIEGSELMANIVTVKNLKVVFNEGNEQVYAVNGVDLSLHQGE
TLALVGESGSGKSVATHALLGLLGKDAVVTADEMLYGETDLLQTSRRQYTYLRGQELGLV
FQDPLSGLNPTMRIGRQIGEGLKVHRHVHGHALKQAVFSAIEDVGLADPALIARKYPHEL
SGGQRQRAMIAMALVMQPKVLIADEPTTALDVTLQAQILALIKAQKAKHDLSVIFITHDL
GVVANIADRVAIMYAGKIVEVGTANEIFYHPQHPYTWGLLDAVPSSDDQHDQLFTLPGTP
PDLHQPIKGDAFAPRNPYAMPIDFKKDPPLFQVSPTHFVRSWLLDPRTPHYQLPVTIQKR
WARFAQLHAEQTNDPVVESQQAGGVPV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgatctatttctatatgaaaagtaagtggttagcggcattgttaccccagaatgcgatt
gaaggaagtgaactcatggcgaacatcgttacagttaaaaatttaaaagtcgtttttaat
gaaggcaacgaacaagtttatgccgttaacggcgtggatttaagtttgcatcaaggcgaa
acattagcgttggtaggcgaatcgggatcaggcaagtcggtggcaacccatgctttgctg
gggttgttgggcaaggatgctgtggtaactgctgacgagatgctgtatggcgagacggat
ttattgcagacgagtcggcgtcagtacacctatctgcgcgggcaagagctggggctggtt
tttcaagatccacttagcggtttgaatccgacgatgcgcattggccgccagattggcgaa
ggcttgaaggtgcatcgccatgttcacggtcacgccttgaagcaggcggtgttttcggcg
attgaagatgtcggattagctgacccagctttgattgcccgcaaatatccgcatgaactt
tctggcggtcagcgtcaacgcgcgatgatcgccatggcgctggtgatgcagcccaaagtt
ctgattgctgatgaaccgaccaccgcgttggacgtgacgttgcaggcacaaattttggcg
ttgattaaagcgcaaaaagccaaacatgatttgagtgtcattttcatcacccatgactta
ggcgtagtcgccaacattgcggatcgtgtggcgattatgtatgcgggaaaaattgtcgaa
gtggggacagctaacgagattttctatcatccccagcatccctatacttggggattgcta
gatgccgttcctagttcagatgatcaacatgaccaattgtttaccttgccgggaacgcca
cctgatttgcatcaacctattaagggggatgcttttgctccgcgcaatccttacgcaatg
ccaatcgactttaaaaaagatccgccgttgtttcaagtatcgccgacacattttgtacgt
tcgtggttattagatccgcgaaccccacactatcagctaccagtcactattcagaaacgt
tgggcgcgatttgctcagttgcatgctgaacagacaaacgatccagtagttgaaagccag
caagcgggaggtgtgccagtttga
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