Lacticaseibacillus paracasei BD-II: LCBD_2443
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Entry
LCBD_2443 CDS
T01955
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lcs
Lacticaseibacillus paracasei BD-II
Pathway
lcs03030
DNA replication
lcs03430
Mismatch repair
lcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCBD_2443
03430 Mismatch repair
LCBD_2443
03440 Homologous recombination
LCBD_2443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcs03032
]
LCBD_2443
03400 DNA repair and recombination proteins [BR:
lcs03400
]
LCBD_2443
Enzymes [BR:
lcs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCBD_2443
DNA replication proteins [BR:
lcs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCBD_2443
DNA repair and recombination proteins [BR:
lcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCBD_2443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
AAA_5
RuvB_N
AAA_30
AAA_16
TIP49
AAA_19
Mg_chelatase
AAA_24
AAA_18
AAA_assoc_2
AAA_14
AAA_7
DUF815
Cytidylate_kin
PIF1
Rad17
AAA_28
AAA_17
nSTAND3
AAA_11
AAA_2
Sigma54_activat
SKI
RNA_helicase
SLFN-g3_helicase
DnaX_C
bpMoxR
Sigma54_activ_2
Hemerythrin
TsaE
Motif
Other DBs
NCBI-ProteinID:
AEA57938
UniProt:
A0AB36XB08
LinkDB
All DBs
Position
complement(2388190..2389887)
Genome browser
AA seq
565 aa
AA seq
DB search
MSYQALYRVWRPQQFKDVIGQEAITKTLKNALITGQTSHAYLFTGPRGTGKTSVAKILAK
ALNCLHLEDGEPDNTCEICQAINNGSLTDVIEIDAASNNGVDEIRDIRDKAKYAPTQARV
KVYIIDEVHMLSSGAFNALLKTLEEPPAHVVFILATTEPHKIPATIISRTQRFDFRRITP
EDIVKRMRFILDDKQITYDDAALKVIAKAAEGGMRDALSILDQVLSFGDNHVTTEDALDV
TGGVTTAVLGKYLAAVLAKDHAQALKMIEDLLASGKDAGRLIEDLIEYLRDLLVNQQAPT
LLGDLEKSLLDDQFKILSENFKPEQIYHMIDVLNSTQQQLRMTNHPEIYLEVATVRLSET
TTQQVTAAPAQAENPQFEKLTAKVKQLSDQLKRVEANGGTIPPPTRTRKHVKAKANHVNR
KAIYPILGAATKQDLTNLKDVWPNLLGLLSITKRAMMKVSEPVAASPNGVIVSFDYDIYV
ERAMNDAALMTELESGLQKLTGKQPKIVLVQSDVWPTIRQDYIQELKAPENKEQKADTKP
QIPPVVSKLTELFGKDAPNVTIKND
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
gtgagttatcaagcgttatatcgggtgtggcgcccgcagcaatttaaagatgtgattggc
caagaagccatcaccaagacgctgaaaaatgcgctgattactggccagacaagccacgcc
tatctttttaccggcccccgcggcaccggtaaaacatcggtcgccaagattctggccaag
gcactgaactgtctacacttggaggatggtgagccagataatacttgtgaaatttgtcag
gctattaataatggcagtttgaccgatgttatcgaaattgatgccgcttctaacaacggc
gtggatgagattcgtgacattcgggacaaggcaaaatatgcgccaacacaagctcgcgtc
aaagtgtatatcatcgatgaagtgcatatgttatcgagcggggccttcaacgctctgctg
aaaacgctggaagaaccgccggcgcatgtggtgtttattttagccacgacggagccacat
aaaatcccagcaacgattatttcgcgaacacaacgatttgattttcgccggatcacgccg
gaagatatcgttaagcgaatgcgttttattttggatgataagcaaatcacatacgacgat
gctgcgttgaaagtgattgccaaagctgctgaaggcggcatgcgggatgccttatcgatt
cttgatcaagtgttgagttttggcgataatcacgtcacaacggaagatgcacttgatgtc
acaggcggtgtgaccactgctgttttgggcaagtatttagccgcggtcctcgcaaaggat
catgcgcaggcattgaaaatgatcgaggatttgttagcgtcaggtaaagatgctgggcgg
ttaatcgaagatctgattgaatacttgcgggatctgttggttaatcaacaagcaccgaca
ctcttgggtgatttagaaaaaagcttacttgatgatcaattcaaaattctgagcgagaac
ttcaagccagagcagatctaccacatgattgacgtgttgaatagcacgcagcaacaactg
cggatgaccaatcatccggaaatttatctagaagtggcaacggttcgattaagcgaaacg
acaacgcaacaggttacggcagcaccagcacaggcagaaaatccgcaatttgaaaaattg
acggcaaaagtcaaacagctgagtgatcaactgaaacgggttgaggcgaacggcggcacc
attccgccaccaaccagaacccggaaacatgtgaaggccaaagccaaccatgtcaatcgt
aaagctatttatccgattttaggtgccgcaaccaaacaggacctgaccaatttaaaggat
gtttggccgaatctgctgggtctgcttagtatcacgaaacgcgccatgatgaaagtcagt
gaaccggttgctgccagtcctaacggtgtgatcgtgagtttcgattatgatatctacgtt
gaacgcgccatgaatgatgctgcgctgatgacggaattggaaagtggtctgcaaaaatta
accggcaagcagccaaaaattgttttggttcaaagtgatgtctggccaaccattcgacaa
gattatattcaagaattgaaggcccctgaaaacaaggaacagaaagctgacactaaaccg
cagataccgccagttgttagcaaattaacagaactatttggtaaagatgcacctaacgta
acaatcaaaaatgactag
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