Companilactobacillus crustorum: BI355_0334
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Entry
BI355_0334 CDS
T04712
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lct
Companilactobacillus crustorum
Pathway
lct03420
Nucleotide excision repair
lct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BI355_0334
03430 Mismatch repair
BI355_0334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lct03400
]
BI355_0334
Enzymes [BR:
lct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BI355_0334
DNA repair and recombination proteins [BR:
lct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BI355_0334
MMR (mismatch excision repair)
Other MMR factors
BI355_0334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
UvrD-helicase
AAA_19
AAA_30
Viral_helicase1
SLFN-g3_helicase
PhoH
DEAD
NACHT
AAA_11
AAA_16
YidB
Motif
Other DBs
NCBI-ProteinID:
APU70690
LinkDB
All DBs
Position
complement(369749..372031)
Genome browser
AA seq
760 aa
AA seq
DB search
MFLMTINQTKAEEQERVNSVAKKIDDKIERVDQSIEQAHQETNRIERNYGENTKVNTTEV
DDQMETNASVQQQKQLVALAVENENILNSNRLKLENLQGSPYFGRIDIVEDGEKDTLYIG
TSTLQDDDGEFLIYDWRAPISGIYYNGMLGKVHYQTPNGTAEVDLKKKRQFQIVHNKIRT
MFDTNETVGDEILQSVLSEYSDEYLKNIVATIQHEQNTIIRDTHSDVLLVQGVAGSGKTS
AILQRVAYLLYHSRSTMNADNIVLFSPNKLFSNYISEVLPSLGERNMRQVTLNEFISLRL
TGVQVETLFERYERDEHNLPSTAIKMRLYKESDDFLDKLQELEEQHPEHILHFENVIFEG
KPFFTKEEISDIYDHVNHAYHIPDRFLKTKNILIKQLQKRIHEDRNEDWVQAEIDNLSDE
DFQQIITDHNIEESSNQREIIAEEFLRERYAPIYNALLNNYFFNPYKEYLFLLGTMKQNL
VSDNIWQTMIESIDDQIESHKLKLSDSIAILYLRDIITDGGINHAIQHIFIDEVQDYTMA
QLKYISHAFPNAKMTLLGDRAQDVLTSSYRQNDLVTEVNDLFSKKRITTITLNQSYRSTA
EITKFATKLLPNGDEVKAFSRQGEDPVIKVFEDDNYYQGLKETAKDLNKKYETVAILTRN
QAQAEQIYTHFSDESIVTLVDADFRSIPKGILILPIYLAKGLEFDAVIGHDISATNYPHQ
RSVDVLYTICTRAMHSLTLCVDKNISPLLNSEPAELISEK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
gtgtttttaatgacgattaaccaaaccaaagctgaagaacaagaacgtgttaattcagtt
gctaaaaaaattgatgacaaaattgaacgtgttgatcaaagtattgaacaagctcatcaa
gaaacaaatcgaattgagcgtaactatggtgaaaataccaaagtcaatactaccgaagtc
gatgaccaaatggaaactaacgcctctgttcaacaacagaaacagttggtggctttggct
gttgaaaatgaaaatattttaaattctaatcgcttgaaactcgaaaacttacaaggatcg
ccttattttggcagaatcgatattgttgaagatggtgaaaaagacacgctttatataggt
acttctacccttcaggatgatgatggcgaatttttgatttacgattggcgtgctcctatt
tcaggtatttattacaatggaatgttaggcaaagttcattaccaaacacctaatggaact
gccgaggtcgatttaaagaaaaaacgtcaatttcaaatcgttcataacaaaattcgtacc
atgttcgataccaacgaaaccgtcggcgatgaaatactccaatctgtcttaagcgaatac
agcgacgaatacttaaaaaatattgttgctaccattcagcatgaacaaaatacaatcatc
cgtgatactcactctgacgtcctattagtccaaggtgttgctggctctggtaaaacatca
gctatcttgcaacgtgttgcttacttgctctaccacagccgttcaacaatgaatgcggac
aatattgttttgttctcacccaataaattattcagtaactatatttctgaagttttgcct
agtttaggtgaaagaaatatgcgccaagttactttaaacgagttcatttccttacgtcta
accggagttcaggttgaaacactctttgaacgttatgaaagagatgaacataatcttcct
agtacagctatcaagatgcgtttgtataaagaaagtgacgacttcttagataaattgcag
gaacttgaagaacaacatcccgaacatattttgcattttgaaaatgttatttttgaaggt
aaaccattctttactaaagaggaaatttcagatatctatgatcatgttaaccatgcttat
cacattcctgaccgcttcctcaaaactaaaaacatcttaattaaacaacttcaaaaacga
atccatgaagatcgtaatgaagattgggttcaagcagaaattgataatctttcagatgaa
gatttccaacagatcattactgatcataatattgaggaatcttcgaaccaacgtgaaatt
attgcagaagaattcttacgtgaacgctatgctcctatctataatgccttgctcaataac
tatttcttcaatccctataaagaatatcttttcttattgggcacaatgaagcaaaactta
gtttctgacaatatttggcagacaatgattgaatcaattgatgatcaaatagaatctcac
aagttaaaacttagcgattctatagcaattctttatcttcgcgatattattaccgatggt
ggtatcaatcatgccattcaacatatctttatcgatgaagttcaagactacacaatggct
caattgaaatatatttctcatgccttccctaatgccaaaatgacactcttgggcgatcga
gctcaagacgtattaacaagttcttatcgtcaaaacgatttagttacagaagttaacgat
ctctttagcaaaaagagaataactacaattaccctcaatcaaagttatcgttctaccgcc
gagatcactaaatttgctaccaaactgttgcctaatggcgatgaagttaaagctttctca
cgccaaggcgaagatcctgtcattaaagtttttgaagatgacaattattaccaaggcttg
aaagaaactgccaaagatcttaataaaaaatacgaaactgtagcaattttaactagaaac
caagctcaggctgaacaaatttatactcactttagcgatgaatcgattgttactttagtt
gatgctgatttccgttccattcctaagggaattttgattttaccaatttatttggctaag
ggacttgaatttgacgctgtaattggtcatgacatttctgctaccaattatcctcatcaa
cgtagtgttgatgttctctacactatttgtaccagagctatgcacagtttaaccttgtgc
gttgataaaaatatttcacctttattgaacagcgaacctgccgaacttatttctgagaag
taa
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