Companilactobacillus crustorum: BI355_1272
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Entry
BI355_1272 CDS
T04712
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lct
Companilactobacillus crustorum
Pathway
lct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BI355_1272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lct03400
]
BI355_1272
Enzymes [BR:
lct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BI355_1272
DNA repair and recombination proteins [BR:
lct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BI355_1272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
PIF1
HHH_5
AAA_22
UvrD-helicase
nSTAND3
AAA_12
AAA_29
RsgA_GTPase
UvrD_C
SLFN-g3_helicase
AAA_23
AAA_28
Herpes_Helicase
AAA
T2SSE
AAA_16
NPHP3_N
NTPase_1
AAA_25
MMR_HSR1
DUF4926
Rad17
cobW
AAA_17
Motif
Other DBs
NCBI-ProteinID:
APU71591
LinkDB
All DBs
Position
complement(1293424..1295787)
Genome browser
AA seq
787 aa
AA seq
DB search
MGTVKAIFFENPENLYKIFTIKVKKTNTDWDAGDIVVTGSFGEISEEEEYRFEGKIVDHP
KYGKQFQATSYKRSRPNGRKELISFFSSEEFPGIGKKKAEKIVDELGNDAIDKILQDPHA
LDFLKLGEEKTQNIIEQISSNHQTEQALYQLNNYGFGPTLSARIYQKYGPQTLDKITEDP
YQLVLDVKGVGFKRADELAKRLGITGDDLRRIKGALIQMVTLSVNETGDTFVDGQNLVKR
VTGVLRASSTPDLTKKLVDGLRGLVKDGVLLVEDGNVYEKDLSDSEWSIAQSLKMIDDTF
KGVSWSQHALKKELKQIETDFKVKYDESQEKAIKQSLTHPVFLLTGGPGTGKTTIINAIV
AAYAKLNDMPLDPAADDYAIALAAPTGRAAKHMGESTGLPAMTIHRLLGLTGTEDDEFAE
PSLDCKLLIIDEMSMVDTKLFKLLISAVQPGTQVVLVGDRDQLPSVGPGQIFADLINSEV
FPTMVLKNIHRQDGDSTIIQLAHDINEGLIEDDVFQNKSDRSFINCSSREVPSVLSQIIS
KSNDRGFDIADVQVLAPMYRGQAGIDNLNFVIQNVVNPMTPKRKEVSMGNTKYRINDKVV
YLVNTPEDNVFNGEIGKIVGIILAKENTDHVDQLVIDFDGNEVTLDRKDWTNIALAYCTS
IHKSQGSEFEMVILPLVNEESRMLRRNLLYTAVTRAKRLLIMVGDRSAFERSIRDQSSER
QTTLKERIFTTFKIKPKQTDDAPEIVEEEQPKDYRLTMDLIMNNSINPMIGMDQITPADF
LEKEASK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
ttgggtactgtcaaagccatcttttttgaaaatcctgaaaacctctataagatctttaca
atcaaagttaaaaaaaccaatactgattgggatgctggagatattgtagtaactgggagt
ttcggcgaaatatcagaggaagaagaatatcgtttcgaaggtaaaattgttgatcatcct
aaatatggcaagcaattccaagctacatcttacaaacgtagtcgtcccaatggtcgaaag
gaattgataagctttttctcaagtgaagaatttccgggtattggcaagaaaaaagctgag
aaaattgttgatgaattgggaaatgatgcaatcgataaaattctacaagaccctcatgct
ttagattttttaaaattgggtgaagaaaaaactcaaaatatcattgaacaaatttctagc
aatcatcaaactgagcaagctttgtatcaattgaacaattatggttttggaccaactcta
agtgcccgtatctatcaaaagtatggtcctcagactttggataaaatcacagaggaccct
taccaactagtgcttgatgttaaaggagtcggttttaaaagggctgatgaattagctaag
agacttggtattacaggtgatgatctcagaagaatcaagggcgctttgatacagatggtg
actttgagcgtcaatgaaactggagacacttttgttgatgggcaaaatttggttaagcga
gtaaccggggttttacgtgctagttctacacctgatttaactaaaaagttagtcgatggt
ttgcgtggcttagttaaagatggagttcttttggttgaagatggcaatgtttatgagaaa
gatttgtctgacagcgaatggtctatagcacaatctctcaagatgattgatgatactttc
aaaggagtttcttggagccaacatgctttgaaaaaagaacttaagcaaattgagactgat
tttaaagttaaatatgatgaatcgcaagaaaaggctatcaaacagtcattgacgcatcct
gtgttcttgctgactggtggtcccggaactggaaaaactacaattatcaatgcaattgta
gcggcatacgccaagttaaacgatatgcctctagatcctgcagcagatgactatgcgatt
gctttagcggctcctactggtcgtgctgctaaacacatgggggaatcaactggattgcct
gcaatgacaattcatcgtttgctgggattaactggaacagaggatgatgaatttgcagag
cccagtttggactgtaaattgttgatcattgatgaaatgtcgatggttgacactaaacta
ttcaaattactcatttccgcagttcaaccaggtactcaagttgttttagtgggagatcgt
gatcagctgccatcagttggtcctggtcaaatatttgccgacttaatcaatagtgaggtt
tttccaacaatggttttgaaaaatatccaccgtcaagatggcgattcaactatcattcaa
ttggcacatgatattaatgagggactgattgaggacgatgtttttcaaaataaatccgat
cgaagttttattaattgtagtagtcgcgaagttccaagtgttttgtcgcaaattattagc
aaatcaaatgatcgtggttttgatattgctgatgttcaagtgttagctccaatgtatcga
ggtcaagcgggaattgataatttgaacttcgtgattcaaaatgtggttaatcctatgacc
cccaagcgtaaagaagtttctatgggaaatacgaagtatcggattaatgataaagtcgtt
tatttagtcaatacgccggaagataatgttttcaatggcgagattggcaaaattgtggga
attattttagctaaagagaatacagaccatgttgatcaattggttattgattttgatggc
aatgaagtaacgttggatcgaaaagattggactaatatagctttagcttattgtacgtcg
attcataaatcacaaggttctgaatttgaaatggttatcttgccattagttaacgaagaa
tcacgaatgttaagacgtaatttgctttatacggcagttactcgagccaagcgtttgttg
attatggtaggcgatcgctcagcttttgaacgatcaattagggatcaatcgagcgaacgt
caaaccaccttaaaggaacgtatttttactacctttaaaattaagcctaaacaaactgat
gatgctccagagattgtggaagaagagcaaccgaaggattatcgattaacgatggattta
attatgaataattcgatcaatccaatgattgggatggatcaaataacaccagccgatttt
ttagaaaaggaagctagcaaataa
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