Companilactobacillus crustorum: BI355_1551
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Entry
BI355_1551 CDS
T04712
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lct
Companilactobacillus crustorum
Pathway
lct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BI355_1551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lct03019
]
BI355_1551
Messenger RNA biogenesis [BR:
lct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BI355_1551
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
ATP-synt_B
KH_KhpA-B
KH-I_KHDC4-BBP
V-ATPase_G
KH_2
YycC
Motif
Other DBs
NCBI-ProteinID:
APU71856
LinkDB
All DBs
Position
complement(1573706..1575271)
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AA seq
521 aa
AA seq
DB search
MYPAIITFSFALVTLIIGVLFGYALCKDAYEKKLSQAKQTAEDIVSDAKKAAKSLKKEKL
LEAKDEIHQYREKQEDELKERRREIQKQENRVLERQDILDKKDQSLEKREENIENNENNI
TARQHKLDEKDKQLTNTLNEQQAELERVSNLTREQGRKIILGNLSKDLVHERAKMINESN
EQAKQSADKYAKALIVAAIQRSAADTVSESTVTTVSLPNEDMKGRIIGREGRNIRTIESL
TGVDLIIDDTPEAVSLSAFDPVRREIARMALEKLIEDGRIHPARIEEMVDKARKEIDDHI
REVGEQTVYSLGISSVNPDLIKIIGRMQYRTSYGQNVLNHSIEVAKISAVMAAEMGEDVM
LAKRAGLLHDIGKSIDREVDGSHVEIGVDIATKYKEPEVVINTIASHHGDVEPTSFIATI
VAAADAISASRPGARSESMENYIHRLEKLEAIANKHEGVDHSYAIQAGHEIRVMVKPEQI
SDDQAAILARDMKDEIEDNLEYPGHIKVTVVREIRKVELAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtatcctgctatcataaccttctctttcgctctagtaacattaatcataggtgttctt
ttcggatatgctctctgtaaagacgcttatgagaaaaaactttcacaagctaaacaaact
gctgaagatattgtttcagacgctaaaaaggctgctaagtccttaaaaaaggaaaaacta
ctggaagccaaggatgagattcatcaataccgtgaaaaacaagaagatgaattgaaagaa
cgtcgtcgagagattcagaaacaagagaatcgtgttcttgaaagacaagacattttggat
aaaaaagaccaatcgcttgaaaagcgtgaggaaaatatcgagaacaatgagaacaacatt
acagcacgacaacataaacttgatgaaaaagataaacaattgactaatactcttaatgaa
cagcaagcggagctggaaagagtaagtaatttaactcgtgaacaaggaagaaagattatc
cttggtaatttaagcaaagatttagtgcatgaacgtgccaaaatgattaatgaaagcaac
gagcaagctaagcagagtgctgacaaatatgctaaagctttaattgttgctgccattcaa
agaagtgcggctgatacagtttccgagtcaaccgttacaactgtttcgttacctaatgaa
gatatgaagggaagaatcatcggtcgtgagggtagaaatatccgtacaatcgagtcctta
acaggggtcgatttaattattgatgatacgcctgaagcagtttcattgagtgcttttgat
ccagttagaagagaaatcgctcgaatggctttggaaaaactaatagaagatggtcgaatt
catccagctcgtatcgaggaaatggtcgataaagctagaaaagaaatagatgatcatatt
cgtgaagttggtgaacagacggtttatagtttgggaatcagctcagttaaccctgatttg
attaagatcattggacgcatgcagtatcgtacgagttacggtcaaaatgttttgaatcac
tcaattgaagtagctaaaatttccgctgtgatggctgctgagatgggtgaagatgttatg
ttagcaaaacgagcaggtttattacacgatatcggtaaatctatcgatcgtgaagtggat
ggttcacacgtagaaataggtgtggatattgccacgaagtataaagaaccagaagtagtt
attaatacaattgcttcacatcatggagatgttgaaccaacatcatttattgcaacgatt
gttgccgcagccgatgctatttcagcatcacgtcctggagcaagatctgagtcaatggaa
aattatattcatcgacttgaaaaattggaagcaattgccaataagcatgaaggtgttgat
cacagttatgcaattcaagctggtcatgaaattagagttatggttaaaccagaacaaatt
tccgatgatcaggctgcaattttggcccgtgatatgaaagatgaaattgaagataatctt
gaatatcctggacatattaaagttacggttgttcgtgaaattagaaaagttgaattagca
aaataa
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