Companilactobacillus crustorum: BI355_2076
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Entry
BI355_2076 CDS
T04712
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lct
Companilactobacillus crustorum
Pathway
lct03420
Nucleotide excision repair
lct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BI355_2076
03430 Mismatch repair
BI355_2076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lct03400
]
BI355_2076
Enzymes [BR:
lct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BI355_2076
DNA repair and recombination proteins [BR:
lct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BI355_2076
MMR (mismatch excision repair)
Other MMR factors
BI355_2076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD_C_2
AAA_19
Viral_helicase1
UvrD-helicase
SLFN-g3_helicase
PhoH
DEAD
Catalase_C
NACHT
IFT52_GIFT
DUF4351
DUF1706
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APU72370
LinkDB
All DBs
Position
complement(2118235..2120562)
Genome browser
AA seq
775 aa
AA seq
DB search
MMTDKPKVTELDEKQIEQAHLDDVVDKIKKSENRLQEHMDVAEEDLKVINNAFDDIHLGM
DGDSISMDAALSIHQQQQMLDERNNSWQQSRQRLSILKKLEKTPFFARLDFQEKGEPKKE
SVYIGLSSFTDTNDHFLVYDWRAPISSIYYDGKLGEVTYQTPDGEQSVDLFLKRQFLVED
GKIKAYFDTQETIGDQMLLEVLDGKSSTHMKGIVKTIQSEQNKIIRDTKSKLLFVQGAAG
SGKTSAILQRIAFLLYRYRGTLTSSQVVMFSPNSLFNDYIKEVLPEMGEQNMVQMTYKQF
LARRLPNLKVESLSEQFETVVDTENKAISKFVSDIEFFKILTNYSKLLGQSGMAFKDIKF
QGKVFIPKEKIQEFYYSYGPQYNLGNRLDATVDRLVKMLHRKIGAEMRSNWVSEQIENLS
KEQLQALYNTADQEFKNGDEEKKFLARKIITAMLQGVYMNIKHLRFLNVAANYLNFLKAV
PKIVDLSEYNITVEQWNQYVESFTKDFNNKQISMNNLSPYLYLYDLVTGKHGELDMKFVF
IDEIQDYTPFQLAYMKYKFPRARYTMLGDLNQSIFTKKNSQTLLSEAQSLFNADETRVVQ
LVHSYRSTKQITDFTKAILTNGQKIEPFNRNGDLPNLLMAQDEAESVQQVISQLKENDQR
KFTTAIIAKTLDDATHLHEQLKNTGVKTTLIRSENQRLATGTIVLPSFLAKGLEFDAVIM
WDASKDKFDEDEQQLVYTIASRAMHKLTITSIGELSQLLQRVPEKYYENEKSISK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatgacagacaaacctaaagttactgaattagatgaaaaacaaattgagcaagcacat
ttggatgatgtggttgataaaattaagaagtctgaaaatcgacttcaagaacacatggat
gtggctgaagaggacttgaaggttattaataatgccttcgatgatatccacttaggtatg
gatggcgattctatttctatggatgcagctttatcgattcatcagcagcaacaaatgctt
gatgagagaaataacagttggcaacagtcacgacaacgtttgagtattttaaaaaagctg
gaaaagacacctttctttgctagactagattttcaagaaaaaggtgaacctaaaaaggaa
agcgtctatattggtctaagttctttcacagatactaatgatcactttttagtttatgat
tggcgagctccaatttcctcaatatactatgatggaaaattaggagaagttacttatcaa
acaccggatggtgaacaatcagtcgatctcttcttgaaacgtcagtttttagttgaagat
ggcaaaatcaaagcctactttgatactcaggaaacaattggcgatcaaatgttactggaa
gttttggatggtaaatcttcgacccatatgaaggggatcgttaagacaattcaaagtgaa
caaaacaaaattattcgggatacaaagtctaaattactctttgtacaaggagccgctggt
tctggtaaaacttcggctattttgcaacgaattgcctttttgctatatagatatcgtgga
actttgacatctagccaagtcgttatgttctcgcccaattctttgtttaatgattatatt
aaagaagttttgcctgaaatgggtgagcaaaatatggttcaaatgacgtataagcaattc
ttagcacgtcgtttgccaaacttgaaagttgaaagtctttcagaacaatttgaaactgta
gttgataccgaaaataaagctatcagtaagtttgtttctgatattgaattctttaagatt
ttgaccaattacagtaagttattaggtcaaagcggcatggcctttaaggatattaaattt
caagggaaggttttcattcctaaggaaaagattcaagaattctactatagttatggacct
caatataatttgggcaatcgtttagatgcaacagtagatcgcttagtcaaaatgcttcat
cgtaaaattggagctgaaatgcgctctaattgggtatcagaacagattgagaacttgagt
aaagaacaattgcaggctctttataatacggccgatcaagagttcaaaaacggggatgaa
gagaagaaattcttagctagaaagattatcacagctatgctgcaaggtgtttatatgaat
attaagcatttgagattcttgaatgtggcggctaattatcttaactttttgaaggctgtt
ccaaaaattgttgatttaagcgaatataatattactgttgaacaatggaatcagtatgta
gaaagttttacaaaagactttaataataaacagatatcaatgaataatttgagcccttat
ttatatttgtatgatttggtaacgggcaagcatggcgaattagatatgaaatttgtcttt
attgatgaaattcaagactatacgccgttccaattagcatatatgaaatacaagtttcca
agagcacgttataccatgttaggtgacttgaatcagtccatttttacgaagaaaaacagt
caaacattgttatccgaagctcagagtttgttcaatgcggatgaaacacgagtggttcaa
ttagttcactcatatcgttctacaaaacaaattacagactttactaaagcgattttgact
aatggtcaaaaaattgaaccatttaatcgaaatggagatttaccaaatctattgatggct
caagatgaagcggaatcagttcaacaagttattagtcaattgaaggaaaatgatcaacgg
aagtttacgactgcaattattgctaaaactttggacgatgctacgcatttgcacgaacaa
ttgaaaaatacaggggttaagacaactttgattcgttctgaaaatcaacgcttagctact
ggcacaattgtattgccatcattcttagctaaagggctagagtttgatgcagtgattatg
tgggacgcttcaaaagataagtttgatgaagatgaacaacaattagtctacacaattgcc
tctcgagcaatgcataaattgacaattacctcaattggcgaattatcacaattattgcag
cgagttcctgaaaagtattatgagaatgaaaaaagcatttctaaatag
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integrated database retrieval system
