Lentilactobacillus curieae: PL11_002450
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Entry
PL11_002450 CDS
T04707
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lcu
Lentilactobacillus curieae
Pathway
lcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PL11_002450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcu03019
]
PL11_002450
Messenger RNA biogenesis [BR:
lcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PL11_002450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
ATP-synt_B
KH-I_KHDC4-BBP
KH_1
BTBD16_C
DUF7262
DUF3198
Motif
Other DBs
NCBI-ProteinID:
AQW22302
UniProt:
A0A1S6QL04
LinkDB
All DBs
Position
complement(482932..484518)
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AA seq
528 aa
AA seq
DB search
MLIIGLAIIAAVVAGVAGMKLEQKKHAQQIEQAKQQADKIIENAKSDAQSVKTEVINEGK
QRAQEYRASMNEELDSYEADNRTRQSRIDQRNHGIEQTKQRLDQMHTNLAEQQVELDEAK
NEIKELTDKQHLLETERKVALQNNAKLSYEAATEQIIDQLKIDLKRDRDVELRYQNDEAK
VIAPKMARRIADDAIQRGPVDYPREHVEHSVVLPDKGTKQKLLGRENTNLRYIETLTGVD
IVFDRNEPLMLHVVTSDPLRREIARTVIGNLMVTRQINSQTIEQQVETASTNLMTEIRKT
GEDVATGLHIGFVHPDEMKILGRLKYRTSYGQNVLNHSIEVAKIAGLLAAEFGLDVQIAK
RAGLFHDIGKAIDHDVDGTHVELGVQIAETYGEDERVINSIASHHGDVDVTTPIAHLVAA
GDSISGGRPGARSESVEEYINRLRSLEKIARQQQGVKDSFAIQAGREVRVMVDPNKVDDA
KNQELSKQIKDQIEDELTYPGKIKVTLIRSFKAVSYVGADKKKKKRRA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atattaataattggattagcaattatcgcagctgtggttgctggagttgcggggatgaag
cttgagcaaaagaagcacgctcagcaaattgagcaagcaaagcaacaagctgataaaatc
attgaaaatgccaagtcagacgcacagagcgttaagaccgaggtaataaatgaaggtaaa
caacgtgctcaagagtatcgagcctcaatgaatgaggaacttgatagttatgaggcggat
aaccgtactcgccagtctcggattgaccaaaggaatcatgggattgagcaaaccaagcag
cgacttgatcaaatgcatacaaatttggctgaacaacaagttgaacttgatgaagctaaa
aatgaaatcaaggaattgaccgacaaacagcatttattggaaactgagcggaaagttgcg
ttacaaaataacgctaaacttagttatgaagctgctacggaacaaatcatcgaccaatta
aagattgatttgaaacgtgaccgtgacgttgaacttcgttaccaaaatgatgaagcaaaa
gtaattgcacctaaaatggctagaaggattgcggatgacgcaatccagcgtggaccagtt
gattatccgcgggaacatgtagaacattctgttgtgctaccagacaagggcactaaacag
aaactacttggtcgtgaaaataccaacttaaggtacattgaaaccctgactggagttgac
attgtctttgaccgaaacgaaccgttaatgcttcatgtggtaacctctgatccgttgaga
agagaaatcgctagaactgttattggaaacttgatggttaccagacaaattaattcacag
acgattgaacaacaagttgaaactgcatcaaccaatctaatgacagaaattcgcaagact
ggtgaggatgttgctactggccttcacatcggatttgttcatcctgatgagatgaagatt
ctaggtaggctcaagtaccggacaagttatggtcaaaatgtattgaaccactcgattgaa
gtagctaaaattgcaggtttgttggccgctgaatttgggctcgatgttcaaattgcaaaa
cgggccggcctattccatgatattggaaaggcgattgaccatgatgttgatggaactcac
gttgaacttggagttcaaatagctgaaacctatggtgaagacgagcgagtaattaattca
atcgcttctcatcatggtgatgttgacgttaccaccccaatcgcccacttagttgcggca
ggggattcaatttctggaggccgtccaggtgccagaagtgagtcggttgaagagtatatc
aatcgtcttcggagtcttgaaaagattgccagacaacaacaaggggttaaagatagtttt
gccattcaggcaggtcgtgaggtccgcgtgatggttgatccaaataaagtggatgacgct
aaaaaccaagagttatccaagcagataaaggatcaaattgaggatgaacttacttatcca
ggtaagatcaaagttactttgattcgcagttttaaagcagtatcgtacgttggtgctgac
aagaagaaaaagaaaaggcgtgcctaa
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