Lentilactobacillus curieae: PL11_006450
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Entry
PL11_006450 CDS
T04707
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lcu
Lentilactobacillus curieae
Pathway
lcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PL11_006450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcu03021
]
PL11_006450
03400 DNA repair and recombination proteins [BR:
lcu03400
]
PL11_006450
Enzymes [BR:
lcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PL11_006450
Transcription machinery [BR:
lcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PL11_006450
DNA repair and recombination proteins [BR:
lcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PL11_006450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AQW21591
UniProt:
A0A1S6QJ11
LinkDB
All DBs
Position
1356110..1359760
Genome browser
AA seq
1216 aa
AA seq
DB search
MVDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTDPGNTPMEKKQLLSEREYREKKQEYGPRFEAQVGAEAIKTLLK
DVDVEKEVAELKEELKDATGQKRTRAVRRLDILEAFVNSGNELSWMVMDTIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPNLKMNQMGLPVP
MAMELFKPFIMKELVGRKLASNIKNAKRKIERQDDDVFSVLDDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKAMRLHPLVCEAYNADFDGDQMAIHVPLSDEAQAESRLLMLAAGHIL
APKDGKPVVAPSQDMVIGNYYLTMEEVNKIGEGMIFNSPDETDLAFRNGLVHWHTRVGIK
VDAYPKKNFTDEQKGKILVTSVGKILFNQILPAGFPYLNEPTETNLNGYLDDKFFLEPGE
DINEHLKDAEVIPPFKKGFLSDIIAEVYKQYKVTETSLLLDRMKDLGYDDSTKSGLTVGI
SDVTELPDKQEIIDNAHKKVGMVTKQFRRGLITDHERYERVIGIWNDAKDDIQGRLMESF
DPQNPIFMMSDSGARGNVSNFTQLAGMRGLMAAPNGEIMELPITSNFREGLSVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLTISAITEGNEMIEPLY
DRIVGRYALKSVKNPKTGEVITPAGVMIDEDMGQAIVDAGIEEVTIRSAFTCNTIHGVCE
KCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGNADITQGLPRVQEI
FEARNPKGKAEISEVTGTVESIEENPAERTKEVTIKGEADTRTYTVPITARMRVVEGDYI
HRGAALNEGSVDPKELLKVRDVLSTENYLLHEVQKVYRMQGVEVSDKHVEIMIRQMLRKV
RIMDPGDTDVLPGTLVDINDFKESNADAVVSGAVPATGRPVLLGITKAALETNSFLSAAS
FQETTRVLTDAAIRGKNDPLVGLKENVIIGKLIPAGTGMGDYRGIKPEETGDSSTEGVYS
ISELEEKMKAEEEQGK
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatgttaacaaattcgaaagtatgcaaattggactagcatctcctgataagatc
cgtagttggtcttatggtgaagttaagaagccagaaacaatcaactaccggacattgaag
cctgaaaaagatgggctttttgatgaaagaatctttggacctaccaaagattgggagtgc
gcgtgtggtaaatacaagcgaatccgttacaagggtatcgtctgtgaccgatgtggtgtt
gaagttactcgttcaaaagtccgtcgtgaacgaatgggtcatattgaattagcagctcca
gtaactcacatctggtacttcaaaggaatccctagtcggatgggtcttgtccttgacatg
agcccacgtgcccttgaagaaattatctactttgcatcatatgttgtaactgatccaggt
aacacaccaatggagaagaaacaactcttgtcagaacgtgaataccgtgaaaagaaacaa
gaatacggtccacgtttcgaagcccaagttggtgcggaagcaattaagacattgttaaaa
gatgtcgatgttgaaaaagaagttgctgaacttaaggaagaacttaaagatgcaactggt
caaaagagaactcgtgccgtaagacgtttggatatcttggaagcattcgttaattccgga
aatgaactttcatggatggtaatggatacaattccagttattccacctgacttacgtcca
atggttcaactagaaggtggccgtttcgccacttctgatttgaacgatttataccgtcga
gttattaaccgtaataaccgtcttaagagattgcttgaccttaatgcccctggtattatt
gttcaaaacgaaaagcggatgcttcaagaagccgttgatgctttgatcgataatggtcgt
cgtggccgtccagtagccggtccaggtaaccgtcctcttaaatctctttcacacatgctt
aagggtaagcaaggacgtttccgtcaaaacttacttggtaagcgtgttgattactctggt
cgttcagttatcgatgttggtcctaacttaaagatgaaccaaatgggtcttcctgttcca
atggctatggaattattcaagccattcatcatgaaggaactagttggtcgtaaattagcc
tcaaacatcaagaatgccaagagaaagattgaacgccaagacgacgatgtatttagtgta
ttggacgacgtgatcaaggaacatccagttctattgaaccgtgcccctacacttcaccgt
ttgggtattcaagcttttgaaccagtattggtatctggtaaggcaatgcgtcttcaccca
cttgtgtgtgaagcttataatgccgattttgatggtgaccaaatggccatccatgttcct
ttatcagatgaggctcaagcagaatcaagactgttgatgcttgctgctggtcacatcctt
gcacctaaggatggaaaaccagttgttgctccttcacaagatatggttattggtaactac
tacctaactatggaagaagttaacaagattggtgagggaatgattttcaattcaccagat
gagactgatcttgcgtttagaaatggtcttgttcactggcatactcgtgttggtatcaaa
gtggatgcatatcctaagaagaactttactgatgaacaaaagggtaagatcttagttaca
tcagttggtaagattttgttcaaccaaatcttgcctgcaggattcccatacctgaatgaa
ccaacagaaactaacttgaacggttacctagatgacaagttcttcttggaacctggtgag
gatattaatgagcatcttaaagatgcagaagttattcctccattcaagaaaggtttcttg
agtgatatcattgctgaagtttacaagcaatacaaggtaaccgaaacttcacttctacta
gatagaatgaaggatcttggttacgatgactcaactaaatcaggcttgaccgttggtatc
tctgatgttaccgaactacctgataaacaagaaattattgacaatgcccacaagaaggtg
ggaatggttactaagcaattccgtcgtggattgattacagatcacgaacgttatgaacga
gtaattggtatctggaacgatgctaaggacgacattcaaggccgactcatggagagtttt
gatcctcaaaaccctatcttcatgatgagtgattctggagcccgtggaaatgtttctaac
tttacccagcttgctggtatgcgtggtttgatggctgctcctaacggtgaaatcatggaa
ttgcctattacttcgaacttccgtgagggactttctgttttggaaatgttcatttctacc
catggtgctcgtaaaggtatgactgatactgcccttaagactgccaactcaggttacttg
actcgtcgtcttgttgatgtggctcaagatgttattgttcgtgagaaggactgtggtact
gaccgtggtttgactattagtgcaattactgaaggtaacgaaatgattgaaccattgtac
gaccgaattgttggtcgttacgcattgaagtcagttaaaaaccctaagactggtgaagtt
attacaccagctggagttatgattgatgaagatatgggacaagctatcgttgatgctggt
attgaagaagttactatccgttcagcatttacttgcaacaccattcatggtgtctgtgaa
aaatgttatggtcgtaacatggctactggggacgaggttgaagttggtgaagctgttggt
actgtcgcagctcaatcaatcggtgaacctggtactcaattgactatgcgtaacttccat
accggtggtgttgctggtaacgccgatattacccaaggacttcctcgtgttcaagaaatt
tttgaagctcggaaccctaaaggtaaagctgagatttctgaggttactggtactgttgag
tcaatcgaagaaaaccctgctgaaagaactaaagaagtaactatcaagggtgaagcagat
acaagaacttacactgttccaatcactgccagaatgagagttgtcgaaggtgattacatt
caccgtggtgctgctcttaacgaaggttctgtcgatcctaaggaactattgaaagttcgt
gatgtgctttcaactgagaattacttacttcatgaagttcaaaaagtttatcggatgcaa
ggtgtggaagtttcagataagcacgtggaaatcatgattcgtcaaatgcttcgtaaggtt
agaatcatggatccaggtgacactgatgttcttccaggaacccttgtggatattaacgac
tttaaggaaagtaacgcagatgccgttgtatctggtgctgttcctgctactggtcgtcct
gtcttacttggaattactaaggccgcccttgaaacaaacagtttcttgtcagccgcatca
ttccaggaaactactcgagttcttactgatgccgcaattcgtggtaagaatgacccactt
gttggacttaaagaaaatgttattatcggtaagttaatcccagccggaactggaatgggt
gactaccgtggtatcaaaccagaagaaactggcgattcatcaactgagggagtttactca
atcagcgaacttgaagaaaagatgaaagccgaagaagaacaaggcaagtaa
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