Entry |
|
Name |
(GenBank) DNA helicase PcrA
|
KO |
|
Organism |
lcu Lentilactobacillus curieae
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:lcu00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PL11_006675
03430 Mismatch repair
PL11_006675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lcu03400]
PL11_006675
Enzymes [BR:lcu01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PL11_006675
DNA repair and recombination proteins [BR:lcu03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PL11_006675
MMR (mismatch excision repair)
Other MMR factors
PL11_006675
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1386206..1388437
|
AA seq |
743 aa
MADSDLIKGLNTEQRDAVLHTEGPVLIMAGAGSGKTRVLTHRIAYIIESRNVMPWNILAI
TFTNKAAKEMRERVSALLDESGNDVWVSTFHALCVRILRRNIDLLGYNRAFTIADPSEQR
TLVKRILNDMNVDTKKFDPRSILSAISNAKNDMLDPEGFRKNARGPFEEMVADVYDRYQA
ELKQNQSLDFDDLIMMTIELFDQHKDVLEFYQDKFKYIHVDEYQDTNEAQYQLVTLLSQK
YRNICVVGDADQSIYGWRGANMQNILNFKDDYKDAHVTMLEQNYRSTKTILDAANAVIAN
NDNREDKNLWTENNQGDRISYYRGQTENDEARFVVSNIQEEVNKDGQNYGSIAILYRTNA
QSRVMEETLLKSNIPYTMVGGHKFYDRKEIRDVLSYLTLIANPNDSMGFERVVNEPKRGI
GPTSVDKLRRFANDHSWSLLEASLNVDLANEISARAKNSLYQFADTMDKIAKDAKDLSVS
DITEALLDKSGYLDALKSSKTLEAQSRVENLEEFMSVTKKYDDENQQATGIDNLVDFLSD
LALVSDQDDVDEESSAVTLMTLHAAKGLEFPVVFIMGMEEGLFPLGRAAADEEELQEERR
LAYVGITRAKKKLYITNAYSRTLYGRRQNNPQSRFIDEITPDLIQYENVGNDSGPIKTPF
DRKTERAFSTPYHRPSQTVEKPKGSGADKKRWNVGDKVSHKAWGIGTVVKVSGTGEDMEL
DIAFDSQGIKLLLAAFAPIQKQE |
NT seq |
2232 nt +upstreamnt +downstreamnt
ttggctgattcagatttaattaagggactaaatacagagcaacgcgatgcagttttacac
acagaaggtccagtgctaattatggctggggcaggtagtggtaaaactcgggtgttgact
catagaattgcctacataattgagagtaggaacgtgatgccatggaatattctggccatc
acatttacgaacaaagcagctaaagaaatgcgcgaacgggtttcagcattactcgatgag
agtggtaatgatgtttgggtgtcaacttttcatgctctttgtgtgcgtattttaagaaga
aatattgatttattagggtacaaccgagcatttacgattgccgatcctagtgaacagcgg
acgttggtaaagcgaattttgaatgatatgaacgttgataccaagaagttcgacccacgg
tcaattttgtctgcaatttcaaacgccaagaacgacatgctggatcctgaaggttttaga
aaaaatgcccgtggaccatttgaagagatggtggcagatgtctacgaccgttaccaagca
gagcttaagcaaaaccagtcacttgattttgacgatttgatcatgatgacgattgaactc
tttgaccaacataaggatgttctggagttctaccaagataagtttaaatatattcacgtt
gatgagtatcaggatactaacgaagcccagtaccaattagtgacgttactttcacaaaag
tatcgcaatatttgtgtggttggggatgctgaccagagtatttatggttggcgtggagct
aacatgcaaaatatattgaactttaaggatgattacaaagatgctcatgtgactatgctt
gagcaaaattatcgttctacaaagacgatattggatgcagctaacgctgtgattgccaat
aatgataatcgtgaggataagaatctgtggactgaaaataatcagggagacagaatttcg
tattatcgtggtcagactgaaaatgatgaagcccgttttgtggtttctaacatccaagaa
gaagttaataaagatggccaaaactatggcagtattgcgattctttacagaacaaatgct
caatcacgtgtaatggaagaaacattactcaagtcaaacatcccatacaccatggttggt
gggcataagttctatgatcgtaaagaaattcgggatgttctttcatatttaacactgatt
gctaatccaaatgactcgatgggatttgaacgagttgtgaatgaacctaaacggggaatt
ggcccaaccagtgttgataagctacgaagatttgcaaatgatcactcgtggagtttgcta
gaggcttctttgaatgttgacttagcaaatgagatttctgcgagggcaaagaattcactc
taccagtttgctgatacgatggataagattgctaaagacgcaaaagacttgtcagtttct
gatatcactgaggctttgttagataaaagtgggtacctagatgccttgaagagttctaaa
acgttggaagctcaatcaagagtggaaaacttggaagaatttatgtcagttaccaaaaaa
tatgatgacgagaatcaacaagctactggaattgataacttagtcgacttccttagcgat
ttagccttagtttcagatcaagatgatgttgatgaagaatcatcagcggttacgttgatg
actttgcatgctgctaagggactagaatttcccgttgtgtttatcatgggaatggaagag
ggattattcccacttggtagagctgctgctgatgaagaggaattacaagaagagcgtcgg
ttagcttatgttggaattacccgtgccaagaaaaaactctacattaccaacgcttattca
cggactctttatggtcgccggcaaaataatccacaatcaaggtttattgatgaaattaca
cctgatttgattcagtatgaaaatgttggcaatgacagcggtccaattaagacgccattt
gatcgtaagactgagcgggctttttcaaccccatatcatcgtccaagccaaacggttgaa
aaaccaaagggctctggagctgataagaagagatggaatgtgggcgataaggtatcacat
aaagcatggggaatcggtacagtggtcaaagtttctggtaccggtgaagatatggaatta
gacattgcttttgattctcaaggaattaaactgttgttggctgcatttgcgccaattcaa
aaacaagaataa |