Lentilactobacillus curieae: PL11_007230
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Entry
PL11_007230 CDS
T04707
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lcu
Lentilactobacillus curieae
Pathway
lcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PL11_007230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcu03019
]
PL11_007230
03009 Ribosome biogenesis [BR:
lcu03009
]
PL11_007230
Enzymes [BR:
lcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PL11_007230
Messenger RNA biogenesis [BR:
lcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PL11_007230
Ribosome biogenesis [BR:
lcu03009
]
Prokaryotic type
rRNA helicases
PL11_007230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AQW21726
UniProt:
A0A1S6QJF3
LinkDB
All DBs
Position
1507541..1509091
Genome browser
AA seq
516 aa
AA seq
DB search
MKFSELGLSDSLLSAISSSGFEEATPIQAETIPMVLQGKDVIGQAQTGTGKTAAFGLPIL
QNVDLNSKDIQALVISPTRELAIQTQEELYRLGKDEKAKVQAVYGGADIRRQINNLKNHP
QIVVGTPGRILDHISRHTLKLENLKFLVLDEADEMLNMGFLEDIESIIKQTPAERQTLLF
SATMPPAIKRVGVQFMKDPHHVKIKAKELTTDLIDQYYVRVKEYEKFDTMTRFFDVQDPE
VTIVFGRTKRRVDEVSKGLEARGYKAAGLHGDLTQSRRTQIMNEFKKGKIDILVATDVAA
RGIDISGVTHVYNYDIPSDPDSYVHRVGRTGRAGQHGVSVTFATPNEMDYLREIEKLTKV
RMLPLKPPTEEEAFVGQMNAAESEIGDLIQKTNTDKYADMANKLLDEYEATDLVAALLNE
TTRDNVKVKITPERPLSRGGRSRRGGGGHGRGGHGGSRNRNDSRGGHRGNGGSRGGWSKR
SSDRNKKNGGSRRDGGKREGGNRSSDKKKNFTIKNS
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtttagtgaattaggattgtcagatagcttattgtctgctatctcaagtagtggt
tttgaagaagccactccaatccaagccgaaaccattccgatggttctacaaggtaaggat
gttattggtcaagcccaaacaggaactggaaagacagcggcctttggactaccaatctta
caaaatgttgatttaaacagtaaagatatccaggcattggtgatttcaccaacccgggaa
ctagcaattcaaacccaagaggaattatatcgtcttggaaaagatgaaaaggctaaggtt
caggctgtttatggtggtgccgatattcgtcgccaaattaacaacttaaagaatcatcca
caaatcgtcgttggtactccaggacggattttggatcacattagccgtcatacactcaag
ctagagaatttgaagttcctagttcttgacgaagccgacgaaatgttgaacatgggattc
cttgaagatattgaatcaatcatcaagcaaactcctgctgaaagacaaacccttttgttc
tcagcaacaatgccaccagcaatcaagcgggttggggttcagtttatgaaggatcctcat
cacgttaaaatcaaggctaaggaattgaccactgatttaattgatcaatactacgttcgg
gttaaagaatacgagaagtttgatacaatgactcgcttctttgacgttcaagatccagaa
gtaacaatcgtgttcggtcggactaagcgccgggtagacgaagtttctaaaggacttgaa
gctcgtggctacaaggccgctggtcttcatggtgatttaactcaatcacgcagaactcaa
atcatgaacgaatttaaaaagggtaagattgatattttagttgcgactgacgttgctgct
cgaggaattgatatttctggagttactcatgtctataactacgatattccatctgatcca
gatagttatgttcatagagttggtagaactggccgtgccggccaacacggagtttcagta
acctttgcaactccaaacgaaatggactaccttcgtgaaattgaaaagcttactaaggtg
agaatgttgcctttgaagccaccaacagaagaagaagcatttgttggtcaaatgaatgct
gctgaatcagaaattggtgatctgattcaaaagaccaacactgacaagtatgctgacatg
gctaacaagttgcttgacgagtacgaagctactgaccttgttgcagcactgttgaacgag
acaactcgtgacaatgttaaggttaagatcacaccagaacgtccactatcacgtggtggt
cgttcacgtcgcggaggcggtggacatggtcgtggcggtcacggtggttctagaaataga
aatgattcccgtggtggtcatcgtggtaatggcggcagtcgtggcggttggagcaagcgc
tcatcagaccgtaacaagaaaaacggcggcagtcgacgtgatggcggtaaacgcgaaggc
ggaaaccgtagttctgacaaaaagaagaactttaccattaaaaacagttaa
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