Latilactobacillus curvatus: FBA2_04175
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Entry
FBA2_04175 CDS
T04808
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lcv
Latilactobacillus curvatus
Pathway
lcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBA2_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcv03019
]
FBA2_04175
Messenger RNA biogenesis [BR:
lcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FBA2_04175
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
SIS_2
Lactamase_B_6
DUF4453
pre-PUA_NIP7
Motif
Other DBs
NCBI-ProteinID:
ANJ69217
UniProt:
A0A0B2XMF6
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Position
complement(822765..824453)
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AA seq
562 aa
AA seq
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MKLDIKNNETAVFAVGGLGEIGKNMYGVQFQDEIIVIDAGIKFPEDELLGIDYVISDYQY
LQKNQQKIKALVITHGHEDHIGGLPYFLQQVPNVPVYAGPLALALIRGKLEEHGLLRSTE
LHELNEDTVLKFRKTSVDFFRTTHSIPDTLGVAIHTPQGVIVETGDFKFDLTPVGNQPSP
NLQKMARLGEEGVLCLMSDSTNAEVPNFTKSERFVGTSIRHIVERIEGRIIFATFASNIS
RVSQATDAAIANGRKIAVFGRSMEAAVVNGRELGYLNIPDEALVDANELNSLPADKVMIL
CTGSQGEPMAALSRIANGTHRQISIQPGDTVVFSSNPIPGNTMSVNHVINKLSEAGAEVI
HGKVNNIHTSGHGGQEEQKLMLRLIKPKYFMPCHGEYRMQKIHTELAQQCGVEPDNCFIL
ENGDVLALTSDSARVAGHFSAEDVYVDGNGIGDIGNVVLRDRKMLSEEGLVVVVATINLG
EKNILAGPDILSRGFVYMRESGELISEAQRRVFRMIVNTFNANDKVTENQVREAIIDGLQ
DFLFEKTERRPMILPMIIQSTE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgatattaagaataacgaaaccgccgttttcgccgtagggggacttggtgaa
atcggtaaaaatatgtatggtgttcaattccaagacgaaattattgtgattgatgccggc
attaaattccccgaagatgaactcttagggatcgattatgttatttcagactatcaatac
cttcaaaagaatcaacaaaagatcaaagccctcgtcattacccatgggcatgaagatcac
attggtggtttaccttacttcttgcaacaagtccctaatgtacccgtctacgctggtcca
ttggcacttgccttgattcgcggtaagttagaagaacacggccttttgcggtcaacagaa
ttacacgaactaaacgaagataccgtccttaaattccgcaaaacaagtgttgatttcttc
cggactacccattcaattcctgatactttaggggttgcgattcatacacctcaaggggta
atcgttgaaactggggatttcaagtttgacttgaccccggttggtaatcaaccttcccct
aatcttcaaaaaatggcacgtttaggtgaagaaggcgttttatgtttaatgtctgatagt
accaatgccgaagtaccaaactttacaaagtcagaacgtttcgtcggcacttcaatccgc
catattgtggaacgcattgaaggtcgcattattttcgcaacgtttgcttctaatatttca
cgggtctcacaagccactgatgctgcgattgctaacggtcgtaaaattgccgtctttggt
cgcagtatggaagcagcggttgtcaacggtcgtgaactcggttatttaaatattcccgat
gaagctttagttgatgccaatgaattaaattcgttgcccgccgacaaagtgatgattcta
tgtacaggatctcaaggtgaaccaatggctgctctaagccggatcgccaatgggactcac
cgtcaaatttcaattcaacctggcgacaccgttgttttctcaagtaatccaattcctggg
aatacaatgagcgttaaccacgtgattaataagctttcagaagctggtgctgaagttatt
cacggtaaagtgaataacattcatacgtcaggtcacggtggtcaagaagaacaaaaatta
atgctccggttaatcaaaccgaagtacttcatgccttgccatggtgaataccggatgcaa
aaaatccatacggaactcgctcaacaatgtggtgtggaacctgataactgcttcatcctt
gaaaacggtgacgtcttagcactcacttctgactcagcgcgggttgctggtcactttagc
gccgaagacgtttacgttgatggcaacggaattggcgatattggcaatgtcgtgctccgc
gatcgtaaaatgctctcagaagaaggtttggttgttgttgtggcaactatcaatcttggt
gaaaagaacattctcgctggtccagatatcctctcccgtggtttcgtctacatgcgtgaa
tcaggtgaattgattagcgaagcccaacgccgagttttccgaatgatcgtcaatacgttt
aacgctaacgacaaggtcactgaaaaccaagtccgcgaagcaatcattgatggcttacaa
gacttcttgtttgaaaaaacagaacgccgcccaatgattttaccaatgatcattcaaagt
acagaataa
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