Latilactobacillus curvatus: FBA2_04310
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Entry
FBA2_04310 CDS
T04808
Name
(GenBank) RNase J family beta-CASP ribonuclease
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lcv
Latilactobacillus curvatus
Pathway
lcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBA2_04310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcv03019
]
FBA2_04310
Messenger RNA biogenesis [BR:
lcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FBA2_04310
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ANJ69243
LinkDB
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Position
850276..851994
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AA seq
572 aa
AA seq
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MSNIKIMPLGGVRENGKNLNIVEVDDEIYVLDCGLKYPETELLGIDIVIPDMTYLEENAD
RVAGIFLTHGHADAIGALPYFLKEHDVPVFGSELTIALAKITVSSEPKLRKFQNFHVIDA
NTAIDFERATVSFFKTTHTIPGSLGIVVKTDEGQVVYTGDFKFDQSAMPMYQTDYARLAE
IGKQGVLALLSDSANAESPFATANERDIAESILETFKYQTGRIIAASVASNIMRIQQVID
AAYKTGRKVVLTGRDLEKIVRTAMKLSMIILPDDDILVQPKDLSTLAPEQTVILETGRMG
EPIKALQKMATSHHRLIHIEEGDLVYLTTSPSHAMETILAKTKDMIYRAGGEVKAVGDDL
HASGHANKNDLQLMLNLMQPKFLMPVQGEYRQLAAHADIAHKTGMDYKDIFIVGKGDIVA
YEKGKMHVGGQVDATDVMIDGSGVGDIGNIVLRDRKLLSEDGIFIAVVTIDRKNKKIIAE
PKVTARGFVYVKTSKDLMAESAEIIKNAVQNNLDNKEFDWSHLKQDVRENLSHYLYEQTK
RRPVILPVIMEINQNHRRQRKDNKPKAEKAAE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacattaagattatgccacttggcggtgttcgtgaaaacggtaagaatttgaac
attgttgaagtggacgacgaaatttatgtattagattgtgggttgaaatatccagaaact
gaattattggggatcgatatcgttattcctgatatgacctatttagaagaaaatgcagac
cgtgttgctgggattttcctaacacatggtcatgctgatgcgattggagcgcttccttat
ttcttaaaggaacatgatgtaccagtctttgggtctgaattaacgattgctttagctaaa
attacggttagcagcgaaccaaaattacgtaagttccaaaacttccacgtcatcgatgcg
aatacagcaatcgattttgaacgcgcaaccgtttcattcttcaagacaacgcatacaatt
ccaggttcattagggattgtcgttaagacggatgaaggacaagtcgtttatactggggac
tttaagtttgatcaatcagcaatgccaatgtatcaaacggattatgcacgcttagctgaa
attggcaaacaaggtgttttagcactcttgagtgattctgctaatgcggaatcaccattt
gcaacggctaacgaacgcgatattgctgaatccatcttagaaacgttcaagtatcaaacg
ggtcggatcattgcggcttcagtggcttcaaatattatgcggattcaacaagtcattgat
gcggcttataaaacaggccgtaaagtggttttaacgggtcgtgatttagaaaaaatcgtc
cggacagcaatgaaattatcgatgattattttgccagatgacgatatcttggtccaacct
aaagatttaagcacacttgcaccagaacaaacagtgatcttagaaacaggtcggatgggc
gaaccaatcaaggcgcttcaaaagatggcaactagtcatcatcgtttaattcacatcgaa
gaaggcgacttggtttatttaacgacatctccttcacacgcgatggaaacgattttagcg
aagaccaaagatatgatttatcgtgcgggtggcgaagttaaggcggttggcgatgattta
catgcttcaggccatgccaataagaatgacttgcaattaatgttgaatttaatgcaacca
aaattcttaatgcctgttcaaggcgaataccggcaactagcagcacacgctgatattgct
cataaaacaggaatggattacaaagatattttcatcgttggtaaaggcgatattgtcgct
tacgaaaaagggaagatgcatgttggcggacaagttgacgcaactgacgtcatgattgac
ggtagcggtgtcggcgatatcgggaatatcgttttacgcgatcggaaattattatcagaa
gacgggatttttattgctgttgttacgattgaccgcaagaataagaagattatcgcggaa
ccgaaagtcaccgcacgtggttttgtttacgtgaagactagcaaagatttaatggctgag
agtgccgaaattatcaaaaatgcggtgcaaaataatctggacaataaagaatttgactgg
agtcatttgaaacaagatgtccgggaaaacttaagtcattacttgtatgaacaaacgaaa
cgtcggccagtgattctaccagtgattatggaaattaatcaaaatcatcgtcgtcaaaga
aaagataataaaccaaaggctgaaaaagccgctgaataa
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