Latilactobacillus curvatus: FBA2_08170
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Entry
FBA2_08170 CDS
T04808
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lcv
Latilactobacillus curvatus
Pathway
lcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FBA2_08170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcv03019
]
FBA2_08170
03009 Ribosome biogenesis [BR:
lcv03009
]
FBA2_08170
Enzymes [BR:
lcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FBA2_08170
Messenger RNA biogenesis [BR:
lcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FBA2_08170
Ribosome biogenesis [BR:
lcv03009
]
Prokaryotic type
rRNA helicases
FBA2_08170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANJ69936
LinkDB
All DBs
Position
complement(1614924..1616495)
Genome browser
AA seq
523 aa
AA seq
DB search
MKFAELGLSEPIMKAIERAGFEEATPIQGETIPLALAGKDVIGQAQTGTGKTAAFGLPIL
QNLDLDNPNIQALIISPTRELAIQTQEELYRLGRDRKAKVQVVYGGADIRRQIRSLKDHP
QILVGTPGRLLDHINRRTVKLDHVKTLVLDEADEMLDMGFVDDIESIIKQVPDQRQTLLF
SATLPAPIMKIGKSFMTNPEMIKVKSKELTADLIDQYYVRAKDFEKFDIMTRLFDVQSPE
LTLIFGRTKRRVDELTRGLKARGYNAEGIHGDLSQQKRMSVLKSFKAGRLDILVATDVAA
RGLDISGVTHVYNYDIPQDPDSYVHRIGRTGRAGKSGVSVTFVTPNEMEYLHIIENLTKK
RMLPLQPPTEKEAFKGQLAAAVADINSMIEKGQLAKFSEEAEELLKQFSDVELASVLLKT
ISKESVPVKITPERPLPSRKKGGNRSGNRNGGGNRRGGNGGGYRGGNRRGNGDGKRRGND
NKDGRHNSGNGDSSKRRSNDNRDNRKKTDGRSKRNFTIRTNDK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattcgcagaattaggtttatcagaaccaattatgaaagccatcgaacgcgctggc
tttgaagaagcaacacccatccaaggcgaaacaatcccattggcattagctggtaaggat
gttatcggtcaagcacaaactggtaccggtaagacagccgcttttggtttaccaatctta
caaaacttagacttagacaatcctaacattcaagcattgatcatttcaccaacgcgtgaa
ttggcaatccaaacacaagaagaactctatcgcttaggtcgcgaccgtaaagcgaaagta
caagttgtatacggtggggctgacattcgtcgccaaatccgttcattaaaagatcaccca
caaattcttgttgggacaccgggtcgtttattggatcatatcaaccgtcgcacagttaaa
ttagaccacgtgaaaacattggtcttagatgaagctgacgaaatgttagacatgggcttc
gttgatgatatcgaaagcatcatcaaacaagtgccagaccaacgtcaaacacttttattc
tcagcaacattaccagcaccaatcatgaaaatcggtaagagcttcatgactaaccctgaa
atgatcaaagtgaagtcaaaagaattaacggctgacttaattgatcaatactatgtgcgg
gcaaaggacttcgaaaaattcgacattatgacgcgtttattcgatgttcaatcacctgaa
ttaacattaatctttggtcggacaaaacggcgtgttgatgaattaacacgcggtttgaag
gctcgtggttacaatgctgaagggattcacggtgatttatcacaacaaaaacggatgagc
gtcttgaaatcatttaaggctggccgtttagatatcttagtggcaacagacgttgctgct
cgtggtcttgatatctcaggtgtgacccatgtttataactacgatattcctcaagatcct
gatagttatgttcaccggattggccggacaggtcgtgccggtaagtcaggcgtttcagtt
acttttgtaacaccaaacgaaatggaatacttacacatcatcgaaaacttaacgaagaaa
cggatgttaccattacaaccacctacagaaaaagaagccttcaagggccaattagctgca
gcggttgcagacatcaactcaatgattgaaaaaggccaattggctaaattcagcgaagaa
gctgaagaattattgaaacaattctctgacgttgaattagcttcagtgcttttgaagaca
atcagcaaggaatcagttcctgttaagataacaccagaacgtccattgccttcacgtaaa
aaaggtggcaatcgtagcggcaaccggaatggcggcggcaatcgtcgtggcggtaacggt
ggcggctatcgcggtggcaatcgtcgtggtaatggcgatggcaaacgtcgtggtaatgac
aacaaagacggtcgtcacaacagtggcaacggcgatagcagcaaacgtcgtagtaatgac
aatcgtgacaaccgtaagaagactgatggccgttcaaaacggaacttcacaattcgtaca
aacgataaataa
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