Lacticaseibacillus paracasei W56: BN194_07540
Help
Entry
BN194_07540 CDS
T02337
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lcw
Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcw03400
]
BN194_07540
DNA repair and recombination proteins [BR:
lcw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BN194_07540
Archaeal homologous recombinant proteins
BN194_07540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_27
AAA_29
nSTAND_NTPase5
HmpF
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCK21701
LinkDB
All DBs
Position
745411..748536
Genome browser
AA seq
1041 aa
AA seq
DB search
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERD
GGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSD
EKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVAS
QAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQL
KQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAK
SDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKT
QQQTSLDNLGLDELITTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAE
TQVAVTTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAAL
KQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTEHWQEQAKLIAGVADKT
GILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARI
DAAEAQSALKTMQKNLPAEATDLASVAAQVTTLQTTITTYQDQLQEAQARVNALDRQLAG
LQADEKHAAAQVTALTKEQAEAKATFTIAVTQYFGADGKQRFAELQLRVSQLPLLNEQVQ
TYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAE
KLVKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRL
QVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVEPAGTGRSHLKIVHSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaaacaattacacatgcaattttttggtccgtatgcagatgcagtcgttgat
tttgacgattttcgcaccagtcccttattcttgatcagcgggccgaccggcagtggtaaa
accacgatttttgatgctttgatttatgccttgtatggtgaaacgtcaggtgagcgtgac
ggtgggcaaatgcgctcaaattttgcaggtaacagcgatttaacaaaggtgacactcacc
tttgatcatgatggcaaacattatttaatcgagcgccaaccgccgcaattgcaaagtaaa
aaacgcggcgatggactaaccgaagtcaaagctaaggtgttgctagctatctcctcagat
gaaaaacaggtggctgagtaccgtaagaaaaatcaagttcaggaacagctagacgccgtt
ttacaccttgatgcttcgcagtttcgacagattgttttgttgccacaaggcgattttcgc
cggttcttagatgctgatagcaatgcgaaagaagatctactgcgtgacttgttcggtact
cagttgattcaacgttggcaaaccgctatgttggcgcagatgaaggccaagggagcagcc
attcaggaccaagagcggatgttagacgttttgatgtcgcagtttgacttcgagacggct
cctgacgagcatgctacgatggcggataagctgtcattgatgagagcaacggtggcgagt
caagcgaaagttgtgacagcaagacaagcgaccgcggcgcaaagtcaccaacgatatcag
gaagcacaaacggcactgcaacaggggcaacaattggcgcaggcttttacagagcgagaa
caagccgccacagctttagcaaaactggcggagcaaaaacaaacccatcagaagcaatta
aaacaaattgaacaattgacatgggtacagcaacatgaaaatgctgcccaacgcgttcaa
aaggctggacaagatcttaaagcggcaattgtgcagtctgaacaaacgcaagcagcttta
acgacgaccgaacagaaattttctctggacaagcaagctttagcacgcttgcaggccaaa
tcagaccagattgaggcccaaaagaaacaactgaatagtttacaggctgttcagcaacag
ttgacagccatcgccgaacaaaataaacaggtgattaaacaagcagcgattgttaatgag
gctgagcttgcgttgacgcacgcacaacagcagttgacagacgcccaaactgttaaaaca
cagcagcaaacaagtctggataacttgggcttggatgagctgataaccacggtcaatact
cagcgcaacttattggctgccttagtgccacaggctgctaattatcaggaagcccaagct
gatgttgcgcagttgtctatggccatcaaaaaaacccaagttacgctggagcaagccgaa
acgcaggtagcagtcacaacctcgcatttgaacaagcttcagcagactcagattcgccaa
caaattgcacatttggctgctaagctcgagcctgacagcccatgtcctgtttgcggcagt
actagccatccgcatccggcgcttgtggttgacgaaccattggtgagcgaagcagcgttg
aaacaagccgatcaggaacggcaaaaggctgccgcaagaaaaactatggtcgagacacaa
ttggcgaatcttgaaacccaactgaaaactgcgaaggccaaaaccgcacaggcaaggcag
gcttttactgagcattggcaagaacaggccaaactgattgcaggcgttgcggataaaact
ggtattttacaacaattaacggcgttgaaaacactggcggcaactaacgagcaccagtta
acggaagcgcaaacggagcacgctgctttgcaagttgcgctaaaaaagagtgacaaggcc
atcactaccggtacgacaaaagttcagcaatgcgaagctagtttgaatacggctagaatt
gatgcggctgaagcgcaaagtgcgttgaagaccatgcaaaagaacctgcccgcggaagcg
actgatttggcgtcggtcgctgctcaagttacaaccctgcagacaaccattacaacgtat
caggatcaacttcaggaggcgcaggcaagggtcaatgctttggaccggcaattagccggg
ttgcaagcagacgagaaacacgccgcggcacaagtgactgctttgaccaaggaacaggcg
gaagcaaaagcaacctttacgatagcagtcacgcagtattttggtgctgatggcaagcaa
cggttcgccgagttgcagctgcgggtatcacaattaccgctattgaacgaacaggttcag
acttatgagcatacacagctcaagcaacaaacgttattagatgccgccaataaaactatt
ggtacccaagcacagccacagcttgatcagctcgaggccgaagcaacagcagcggaaacg
acagcaacaaacgaccaaacggctttgattaagattagtcaggcgcatgatgctgctgaa
aaattggtcaaacaagccgccactatctttacggccaatcaaacggcgcttgcagcctat
gcggatttacaaacactggccactgtgatgaatggcaatggtcccaagaaactcagtctg
gagcgatacgttttgcaggcttatttgcaagaaattctgaatgtggccaatagccgtctg
caggttttgtccaataaccggtatcaatttgttttgcatactagtttgggaacgcagaaa
attcattctggcttggagattgatgtttacgatgatcaggtaggagaaaagcgtgccgtg
cagacgctatcgggcggcgaaagcttcatcgctgcgctcagtctggcattggcgttaggc
gaagtgattcagcaggaaagcggcggcattaacattgatgcgttgtttgttgatgaaggc
ttcggcagccttgatgccaatagtcttgatgtggcgatgaatgcgttggagtcgctagaa
ggtgaatcgcggctgattggcatcatctcccatgtgaccgagttgcgggataatattcct
gaccagttgcaagttgagccagcaggtacgggccgcagccacttgaagatcgtccactcg
gcttag
DBGET
integrated database retrieval system
