Lacticaseibacillus paracasei W56: BN194_09230
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Entry
BN194_09230 CDS
T02337
Symbol
ytzG
Name
(GenBank) Uncharacterized RNA pseudouridine synthase YtzG
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lcw
Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcw03009
]
BN194_09230 (ytzG)
Enzymes [BR:
lcw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BN194_09230 (ytzG)
Ribosome biogenesis [BR:
lcw03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BN194_09230 (ytzG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CCK21870
LinkDB
All DBs
Position
924318..925028
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AA seq
236 aa
AA seq
DB search
MRLDKYLSHLQFGSRKEVKALIRDKRVRVAGDLITDPGYNVLPGIAVEVNDAQADGPLEV
DYLMNKPAGVITATEDPTQSTVLDLIRPHDYRPGLYPVGRLDKDTTGLLLLTTDGNLGHA
LLSPNRHIAKTYAATLAKTLTADMKQQLETGIDLKDFTTAPAQVVVLPDTDGKRIQITIT
EGKFHQVKRMLLAVDNEVTALTRIAMGPLSLPADLAAGEYRALTDDERTDLDNITR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagataaatatttgagtcatttacaatttggtagtcgaaaagaagttaaggca
cttattcgcgacaagcgggtacgtgtggccggtgatttaatcactgatcctggttacaat
gtgttgccgggtatcgcggtcgaggtgaacgatgcccaagcggatgggccgcttgaggtc
gattatttgatgaacaaaccggctggggtgattaccgcaacagaagatcctacgcaatca
acggtgctggatctgatccgaccacatgattaccgaccgggtttatatcccgtaggtcgt
ctggataaagacactactggtctgttgttacttacgaccgatggcaatttaggtcatgca
ctgctttcgcctaatcgtcatattgccaaaacctatgctgcaactttggctaagacatta
actgctgacatgaagcagcaactcgaaaccggcattgatttaaaggacttcacaaccgcc
ccggcacaagtcgttgtcttgccggataccgatggcaaacgcatccagattacaatcacg
gaaggtaagtttcatcaagtcaagcgcatgttgttggcagttgataatgaggtgacggcc
ttgacgcgaattgctatgggaccattgtcattgccagccgatttagctgctggggagtat
cgggctttaaccgatgacgaacggactgatttggataatatcactcgttga
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