KEGG   Lacticaseibacillus paracasei W56: BN194_15110
Entry
BN194_15110       CDS       T02337                                 
Symbol
pdhD
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lcw  Lacticaseibacillus paracasei W56
Pathway
lcw00010  Glycolysis / Gluconeogenesis
lcw00020  Citrate cycle (TCA cycle)
lcw00260  Glycine, serine and threonine metabolism
lcw00280  Valine, leucine and isoleucine degradation
lcw00310  Lysine degradation
lcw00380  Tryptophan metabolism
lcw00620  Pyruvate metabolism
lcw00630  Glyoxylate and dicarboxylate metabolism
lcw00640  Propanoate metabolism
lcw00670  One carbon pool by folate
lcw00785  Lipoic acid metabolism
lcw01100  Metabolic pathways
lcw01110  Biosynthesis of secondary metabolites
lcw01120  Microbial metabolism in diverse environments
lcw01200  Carbon metabolism
lcw01210  2-Oxocarboxylic acid metabolism
lcw01240  Biosynthesis of cofactors
Module
lcw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:lcw00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BN194_15110 (pdhD)
   00020 Citrate cycle (TCA cycle)
    BN194_15110 (pdhD)
   00620 Pyruvate metabolism
    BN194_15110 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    BN194_15110 (pdhD)
   00640 Propanoate metabolism
    BN194_15110 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BN194_15110 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    BN194_15110 (pdhD)
   00310 Lysine degradation
    BN194_15110 (pdhD)
   00380 Tryptophan metabolism
    BN194_15110 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BN194_15110 (pdhD)
   00670 One carbon pool by folate
    BN194_15110 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcw04147]
    BN194_15110 (pdhD)
Enzymes [BR:lcw01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BN194_15110 (pdhD)
Exosome [BR:lcw04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BN194_15110 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_oxidored GIDA HI0933_like FAD_binding_2 DAO NAD_binding_7 FAD_binding_3 AlaDh_PNT_C NAD_binding_8 DFP 3HCDH_N Lys_Orn_oxgnase UDPG_MGDP_dh_N Thi4
Other DBs
NCBI-ProteinID: CCK22458
LinkDB
Position
1463823..1465226
AA seq 467 aa
MVVGDFAIDLDTVVIGSGPGGYVAAIRAAEMGQKVTVIESTFIGGVCLNVGCIPSKALIN
AGHRYQDALEASTFGIHAKGADLDFTKTQEWKQNKVVHTLTSGVSMLFKKHKIDTIMGTA
FLKDDHSLRVMQKDSAQTYTFKNLIIATGSRPIEIKGFKFGKRILDSTGGLNLPEVPKEF
VVIGGGYIGSELASAYANLGAHVTILEGTSSILPNFEKDMVQLVLNSFKKRGVTVITNAM
AKEAEDTGKGVKVTYTADGKEQTIAADYVMVTVGRRPNTDDLGLDIVGVETTDRGLIKVD
AQGRTNKPNIYAIGDIVPGAALAHKASYEGKVAAEAISGKASAVDYKAMPAVCFTDPELA
TTGMTVAEAKDKGIKAKASKFPFAANGRALSLAQTEGFVRLVTNENGTVIGGQVAGAGAS
DLISELTVAVEGGLNVEDLALTIHPHPTLSEVIMDDAEVALGLPINI
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggttgtaggcgattttgcaatcgatttggataccgtcgtcattggttccggccccggc
ggttatgttgctgcgattcgcgcagctgaaatgggtcaaaaggtgaccgtgattgagagc
acgttcattggcggtgtttgtttgaatgtcggctgcatcccatcaaaagctttgatcaac
gcaggtcatcgctatcaagacgccttggaagcaagtacgtttggcattcatgccaaaggt
gctgaccttgatttcacgaaaacccaggaatggaagcaaaataaggttgtgcatacgctg
acaagcggtgtgtcgatgctattcaagaaacacaagattgacacgattatgggcacggcg
ttcttaaaagatgaccatagcctgcgcgtgatgcaaaaagattcagctcagacctatacg
ttcaagaatctgatcatcgcgactggcagccggccaatcgaaattaaaggctttaagttt
ggcaagcgcattttagattcaacagggggtctgaatcttcctgaagtaccaaaagaattt
gtcgtcattggcggcggctatatcggctccgagttggcgagtgcgtatgctaatcttggc
gcgcatgtcacgattcttgaaggcacaagttcgattctgccaaactttgagaaggatatg
gttcagctagttctgaattccttcaaaaaacgtggcgtaacagttattaccaatgcgatg
gctaaagaagctgaagacactggcaaaggtgtcaaagtgacgtacacggccgatggtaag
gaacagacgattgccgctgattatgttatggtgacggttggacggcggccaaatactgac
gatcttggtctcgatattgtcggggtcgaaacaactgatcgcggtttaatcaaggtcgat
gctcaaggccggaccaacaaaccgaatatctatgcgattggcgacattgtgccaggtgca
gcattggcgcataaggctagctatgaaggtaaagtcgctgccgaggccatcagcggcaaa
gccagtgcggttgactacaaagcgatgcctgccgtttgcttcacggaccctgaacttgca
acaactgggatgacagttgccgaggcgaaggataaagggatcaaggctaaagccagcaag
ttcccatttgctgccaatggtcgtgccctcagtcttgcccagacagaagggtttgtccgc
ttggtcactaatgaaaacggtacggttatcggcggccaagttgctggcgccggtgctagt
gatttgatttccgaactgaccgttgctgttgaaggcggtttgaacgttgaggatcttgcc
ttgaccattcatccgcacccaacactgagtgaagttatcatggatgacgctgaagttgca
ttgggactcccaatcaatatttag

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