KEGG   Lacticaseibacillus paracasei W56: BN194_16790
Entry
BN194_16790       CDS       T02337                                 
Name
(GenBank) DNA-directed DNA polymerase III epsilon subunit
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lcw  Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:lcw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcw03400]
    BN194_16790
Enzymes [BR:lcw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     BN194_16790
DNA repair and recombination proteins [BR:lcw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BN194_16790
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD RNase_H_2 DEDDh_C AAA_22
Other DBs
NCBI-ProteinID: CCK22626
LinkDB
Position
complement(1649400..1652195)
AA seq 931 aa
MFKMNAETIFAVVDLETTGTSVKDGDRMIQFGCALMQHGKIIQTISQLVNPDRSVPVAIQ
RLTGLDPNRLVAAPYFEEIAKTLHQLLTDTVFVAHNVNFDYPFLNAEFERVGLPKLQLAA
IDTVELAQILLPEISSFRLPDLTSYLQIEHDNPHQADSDAISTAKLLRQLAARFQALPSP
TQQALVARGSGLLRETGDYLKAIAKPLKPLKRGFVQVGPLVLRRVPTATQETFASAAYPA
TDLEKRHLLQPRYRFRKAQARMMDAVFAHAQEGGPQPLFIEAGTGLGKTLGYLLPYAYVA
TAEHKLVVATSTLVLQSQLIQTAIPTLAAVLGRDLPAIEVKSPQHYIDLNKFAASLHQES
PSRQTQLLQMKLLVWLTQTTTGDLDELHLTTYRAPLFMQIRHTGDSGTPFINPYYTLDFY
RRLRASIDRAAIVVTNHAFLSRHADLLDLEAPFLVVDEAQHFADNTAAAFAQRIDLAQIR
RQLRHLWRLSDPDEDRSLVNVYQNDRQMLPVLAQLNALTTTAQETIEILQHQIYRHFFNG
KTTADQGFVSLSLDQAAINWLVTSQTDNIKTLIKVIGRIKVIATKLDADFNGRQHFFLKS
DGQRFQALAALTVTLIDQRDRLKLLLARLPELVAGQTAVASLTLRQMHDVSSLGLSWDIF
QVGSAIQQLLQRFTAPVFVGATLTTDRSFDFLTAQLGYHDLPETAFLKLRSPFHYRDQAK
VLVATDAPAAGAVSAEAYADYLAAAIELLADNRHQTIVLFNSLATIAAVYQRLAHRPIAD
HKELLAQGVTGSAEKIAKRFAVGDQSLLLGAASFFEGIDYPDRLLEMVILTRLPFDAPEA
AITKARYERLQAAGRDPFTEDALPRATLRLRQSFGRLIRTETDRGIFVVLDPRFITTRYG
RKMQKSLPNIKPMTLPLTDMPGYIKMWLDRA
NT seq 2796 nt   +upstreamnt  +downstreamnt
atgtttaaaatgaatgctgagaccatttttgctgtggtcgatttagaaacaactgggacc
agcgtcaaagacggcgaccggatgatccagtttggatgtgccttaatgcagcacggcaaa
attatccagacaatttctcagttggtgaatccggatcggtcggtaccagtggcaattcag
cgactaaccggcttggatcccaatcgattagtcgcggccccttattttgaagaaatcgcc
aaaacgttgcatcagctgttgactgatacggtttttgtagcgcacaacgttaatttcgat
tatccttttttaaatgcggaatttgagcgagtggggctgccaaagctgcaattagctgcg
atcgacacggttgaattggcgcaaattttattgcctgagattagcagttttcgcttgcct
gatttaacgagttacttacaaattgagcacgataacccgcatcaagccgatagtgacgcg
attagcacggctaaattgttgcgccagctggcggctcgctttcaggccttgcccagtccg
acgcaacaggcgttggttgcgcgcggcagtggcttgttgcgggaaaccggcgattatttg
aaggcaattgctaaaccgttgaaaccgttaaaacgcgggtttgttcaagttggcccgttg
gtcttgcgccgagtgccgacagcaacccaggagacgtttgcgtcagcagcttatccggca
acggatcttgaaaaacggcacttgctccaaccgcgctatcgcttccgcaaggcccaggcg
cggatgatggatgcggtttttgcacatgcacaagagggtggtccccagccacttttcatt
gaggcaggaaccggtcttggcaaaacgcttggatatttgctgccttatgcttatgtcgca
accgccgaacataagttagtggttgcgacatcaacgcttgttttgcaaagccaactaatt
cagacggccattccgactttagccgctgttttaggcagagacttgccagcaattgaggtt
aaaagtccgcaacattatattgatctcaacaagttcgcggctagtttgcatcaagaatcg
ccaagtcggcaaacgcagttattgcaaatgaaattgctggtttggttgacacaaacaacc
acaggcgacctcgatgagttgcacttaacaacttatcgagcaccattgttcatgcaaatt
cggcatactggtgattcaggcacaccatttatcaacccgtattacacacttgatttttat
cggcggctgcgtgcttccattgatcgggcggctatcgtggttacgaatcacgcttttctg
tcacgccacgctgatttgttggaccttgaggcgccatttctggtcgttgatgaagcgcaa
cattttgctgataataccgccgctgcctttgcgcaacggatcgacttagcgcagattcgg
cggcaattgcgacatttgtggcgattgagtgatcccgatgaagatcgctcattggttaac
gtctatcaaaatgatcggcagatgctgcctgtgttggcgcaacttaacgctctaacaaca
acggcccaggaaacgattgaaatcctgcagcaccaaatatatcggcatttctttaacggc
aagacaacggctgatcaagggtttgtgagtctgagcttggatcaagctgctattaattgg
ttagtcacgtcccaaacagacaatattaagacattgatcaaagtcattggtcgcattaag
gtcattgcgactaaactagatgcagatttcaatggccggcaacatttctttttgaaaagt
gacggtcaacgatttcaagccttagccgcgttgacagtcaccctgatcgatcaacgtgac
cgcttgaaattactgttagcgcgcttgccagaactggttgccggccaaactgccgtggct
tctttgacgttgcggcaaatgcatgatgttagcagtcttggcctaagttgggacattttt
caggttggatcagccattcagcagttgctacagcggtttacggcaccggtgtttgtcggg
gcgactttaaccactgaccgttcgtttgactttttaaccgctcagcttggttaccatgat
ttaccagagacagcttttctaaagttacgtagtccttttcattatcgtgatcaggcaaaa
gtactagtcgccacggacgctcctgcggctggtgcggtgagtgcagaagcctatgccgat
tatcttgccgcggcgattgagttgttggctgataaccgacaccaaacgattgtattgttc
aattcactggcgaccattgccgcggtttaccaacgccttgctcatcgaccgattgccgat
cataaagagttattggctcagggggtgactggttcggcggaaaagatcgccaagcgtttt
gcggtcggtgaccaaagtttattgctcggtgccgcaagcttctttgaggggattgattat
ccggatcggttgctcgaaatggtgatcttgacccggttgccgttcgatgcgcccgaagcc
gctatcaccaaagctcgatacgaacgacttcaggcagcaggccgcgatccatttactgag
gatgctttgccacgcgcaaccttgcgattacgccagagttttgggcgcctgatccgaacc
gaaaccgatcgtggtatcttcgttgtcctcgacccccgattcatcaccacacgctacggt
cgaaaaatgcagaaatccttaccaaatattaagccaatgacgttgccactaactgacatg
ccggggtacattaagatgtggctagacagagcgtga

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