Lacticaseibacillus paracasei W56: BN194_17390
Help
Entry
BN194_17390 CDS
T02337
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease recJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw03410
Base excision repair
lcw03430
Mismatch repair
lcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN194_17390 (recJ)
03430 Mismatch repair
BN194_17390 (recJ)
03440 Homologous recombination
BN194_17390 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcw03400
]
BN194_17390 (recJ)
DNA repair and recombination proteins [BR:
lcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BN194_17390 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN194_17390 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BN194_17390 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CCK22686
LinkDB
All DBs
Position
complement(1711285..1713729)
Genome browser
AA seq
814 aa
AA seq
DB search
MNVRHNNMSCRHAFGLCYCQSASDKDNLGLPVNSLSFLWYTGSVRKERDDMTQYQWQLAP
QPAAADAHALSETLGVPPFLATLLLQRGINDQADYDAFVHPDTSRLHDPFALHDMDKAVA
RILKAIEQNEKITIYGDYDVDGLTSSAIMLETLQSLGADPDVFIPDRFTDGYGPNAEVYA
YLQKTGTQLVITVDNGVAGAAVIDPAQAAGMDVVVTDHHELPAKLPHAVAVVHPRHPDGD
YPFGDLSGAGVAFKVATALLGEPPLESVDLAALGTIADLVSLTDENRVIAQLGLKMIQTQ
PRVGLAAILKEAGVAPETVNETTVGFVIGPRLNALGRMGDANPGVTLLTTFEDDVAAELA
EQVGKLNQERQGLVAKIAQEALTMAQAPENQAAKTLLLASKGWHEGVVGIVASKVVEATG
KPTLIMNIADDGETAKGSGRSIEAYHLFKALEPAKEHMVHFGGHHMAVGLTAKTTDLPAI
HAQMEAAAATMLKTVPKPTLPISTRLEDADLTLDHYQLIRQLAPFGQGNPEPVFSVRPQA
IQNVKQIGKENNHLRFQIDQGINVIGFGYGDAAETLATAQAAKLAVQLDQNTWQGHTSLQ
LMLKDYEVKQPQVIDWRMPTIDGGQFKASRTYVFFDAKVKQQFERQFSFGGPTTIAAQVQ
APLANAVLVDLPKDAAALHQVMQYVQPPVAVMFYGAPSRLVAIPTRAEFGAVLRFLKAHP
GFDKHHIPAIAKAVHLTVHQVILAVQVFFELDFVTIEGAFISPVTAPAKKPLQTAKAYAA
RAAFLDLAQQLQTMPRAQLETMLLTEHSDSEVES
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgtccgacacaataacatgtcatgccgacacgcattcggtttgtgttactgtcag
tcagcatctgacaaagataacttaggcttaccggttaattcgctaagctttctctggtat
actggatcggttagaaaggaacgagacgatatgacgcagtatcaatggcaactcgcccca
caacctgcagcagctgatgcacacgcgcttagcgagacattgggtgtcccaccattttta
gcgaccttgttgctgcaacgcgggattaatgatcaggcagattatgatgcgttcgtgcac
ccagacactagtcgattgcatgatccattcgccttgcatgacatggataaagccgttgcc
cggattttgaaggcaattgagcaaaatgaaaaaatcacgatttatggcgattacgatgtt
gatgggttgaccagcagtgccatcatgcttgagaccttgcaaagtttgggcgccgatccg
gatgtgtttattcctgatcgcttcaccgatggttatgggccgaatgccgaagtttatgct
tatttgcaaaaaactggcacacagttggtaatcaccgttgataacggtgttgctggtgcc
gcagtcatcgatccggcacaggctgcaggcatggatgtggtggtgaccgatcatcacgag
ttgccagcaaagttgccgcatgcggtggccgttgttcatccacggcatccagatggcgat
tatccgttcggtgatctttctggggctggcgttgcctttaaggttgcaacggccttatta
ggcgaaccaccgttagaaagcgttgacttggcagctttgggtaccattgctgatctggtc
agcttaaccgatgaaaaccgggtgattgcgcaattaggcttaaaaatgatccagactcag
ccacgggtcgggcttgcggctattttaaaggaagccggtgttgccccggaaaccgtgaat
gaaacaacggtcggttttgtcatcggaccgcggttgaatgcacttgggcggatgggcgac
gcgaatcctggcgtaacgttgctgacgacatttgaggatgacgttgctgctgagttggcc
gaacaagtaggcaagctaaatcaggaacgacaaggattagttgcaaagatcgctcaggaa
gctttgacgatggcacaagcgccggaaaaccaagcggccaaaacattattgctggccagt
aaaggttggcatgaaggggtcgtcgggattgtggccagcaaggttgtcgaagcaacaggc
aagccaacgttaattatgaacattgcagatgatggcgaaactgccaaaggctcaggtcgc
tcgattgaggcttatcatcttttcaaagctttagagccagcaaaggaacacatggtccat
tttggcggccatcatatggcagtcggtctcacagctaaaacaacggatttaccagcgatt
catgcgcagatggaggcggctgcggcaacaatgttgaaaactgttccgaaaccaacgctg
cctatttcaacgaggctggaagatgctgatttgacattggatcactatcaattgatccgt
cagttggcaccgtttggtcaaggcaatcccgaaccggttttctcagtacgcccgcaagct
atccaaaatgtgaaacagattggtaaagaaaacaatcacctgcgttttcaaatcgaccaa
ggcatcaatgtgattggttttggctatggtgatgctgcggaaacactggcaacggcacag
gccgctaaattggcggttcagctggatcaaaacacttggcaaggtcataccagtctacaa
ctcatgttgaaagactatgaagtcaaacagccgcaagtcattgactggcgaatgccaacg
attgacggcggccagttcaaagccagccgcacgtatgtgttttttgatgcgaaagtaaag
caacagtttgagcggcaattttcctttggtgggccaacgaccatcgctgctcaagttcaa
gcgcctttagcgaatgcagttttagtcgacttgccaaaagatgctgccgcgttgcatcag
gtgatgcagtatgtgcagccacctgttgccgtcatgttttacggcgcaccaagccgcttg
gttgctataccgacgcgggcagaatttggggccgtgttgcgttttctgaaggcccaccct
gggttcgacaagcatcacattccagcgattgctaaggcggtccatttaaccgtccatcag
gtgatcttggcggttcaggtgttttttgaactcgattttgttacaatagagggtgctttt
atttctccagtcacagccccggcgaaaaagccgctgcaaacggcgaaggcttatgcagcg
cgtgcagcctttctagatctggcgcaacagttacagaccatgccgcgcgctcagcttgaa
accatgttgctgacggagcattcagacagtgaggtagaatcatga
DBGET
integrated database retrieval system
