Lacticaseibacillus paracasei W56: BN194_17870
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Entry
BN194_17870 CDS
T02337
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lcw
Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcw03019
]
BN194_17870 (rnc)
03009 Ribosome biogenesis [BR:
lcw03009
]
BN194_17870 (rnc)
03036 Chromosome and associated proteins [BR:
lcw03036
]
BN194_17870 (rnc)
Enzymes [BR:
lcw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BN194_17870 (rnc)
Messenger RNA biogenesis [BR:
lcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN194_17870 (rnc)
Ribosome biogenesis [BR:
lcw03009
]
Eukaryotic type
90S particles
RNase
BN194_17870 (rnc)
Prokaryotic type
rRNA processing factors
BN194_17870 (rnc)
Chromosome and associated proteins [BR:
lcw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BN194_17870 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dsRBD
DND1_DSRM
DUF6614
Motif
Other DBs
NCBI-ProteinID:
CCK22734
UniProt:
K0NB31
LinkDB
All DBs
Position
complement(1764849..1765568)
Genome browser
AA seq
239 aa
AA seq
DB search
MHFRGGFLMVASEFVSELRQRYGIEFHDLSLLDEAFTHSSYVNEHKELGLKDNERLEFLG
DAVLELTVSDYLYRKFPDKPEGDLTRIRAAAVQTAAFSAFSKEAHFDRYIKLGKGEEKAG
ARKRLTLLEDLFEAFNGALYLDQGRDANIRFAQQIIFPKIDAGEFSDDQDHKTALQEVLQ
QNGDVAIVYHLLDEQGPAHERQFHVDVEVDGRVLGTGFGKNKKAAEQAAAKAALASLKR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgcattttcgaggaggatttttaatggttgcctcagagtttgtgagtgaattgcgtcaa
cgttatgggatcgaatttcatgacctcagtctattggatgaggcgtttacgcattcctca
tatgtgaatgaacataaagaattaggtttaaaagacaatgaacgattggaatttttaggc
gatgctgtcttggaattgacagtttcagattatttgtatcgcaagtttcccgacaaaccc
gaaggcgatctcacccgaattcgggcagcggctgttcagacagcggccttctcggctttt
tcaaaagaagcgcactttgaccggtatattaaacttggcaaaggtgaggaaaaagctggg
gcgcggaaacgcttaacgttgctagaagatttatttgaggccttcaatggcgccttatac
cttgatcaaggacgcgatgccaacattcggtttgctcagcagattattttcccgaaaatt
gacgcgggagagttttcagacgatcaagaccacaaaacggctttacaggaagttttgcag
caaaatggtgatgtggcgattgtttatcacttattagatgagcagggaccagcccatgag
cggcagttccacgttgatgtcgaagtcgatggccgggttttgggtaccggttttggcaag
aataagaaagcggctgagcaagctgctgcaaaagctgcattagccagcttgaaacggtaa
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