Lacticaseibacillus paracasei W56: BN194_18930
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Entry
BN194_18930 CDS
T02337
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw03030
DNA replication
lcw03410
Base excision repair
lcw03420
Nucleotide excision repair
lcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN194_18930 (polA)
03410 Base excision repair
BN194_18930 (polA)
03420 Nucleotide excision repair
BN194_18930 (polA)
03440 Homologous recombination
BN194_18930 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcw03032
]
BN194_18930 (polA)
03400 DNA repair and recombination proteins [BR:
lcw03400
]
BN194_18930 (polA)
Enzymes [BR:
lcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN194_18930 (polA)
DNA replication proteins [BR:
lcw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BN194_18930 (polA)
DNA repair and recombination proteins [BR:
lcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BN194_18930 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN194_18930 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Spectrin_Dys-1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCK22840
LinkDB
All DBs
Position
complement(1862192..1864900)
Genome browser
AA seq
902 aa
AA seq
DB search
MTMTTNSGRGDSSGRRKGSPLMASKTKLLLVDGNSVAFRAFFALYNQLDRFTNQDGLHTN
AIYAFNNMLEIVLKAVQPDAALVAFDAGKTTFRTAKYADYKSGRAKTPSELLEQLPYIKE
LLDDMGIAHYELKDYEADDIIGTMDKRADEAGWETTIVTGDRDLTQLTTDRTTVQVTVKG
VNELEAYTPAHVKEKLGITPAQIIDLKGLMGDTSDNYPGVTKVGEKTALKLLNQYGSMEN
LYANVDDMKKSKLKENLINDKDSAFLSKQLATIDRDAPLTVDLADVTYAGPDLDKLRDFY
TKMNMNSLLKKIGGSVAKPVQAVHFSVLDEQSILALTKLTEPLTFEIEMLEDNYHVAEQI
GFFIGTKEETYVSTDITLLTLPAVKRWLEDAKRDLTVFDGKRNIVAANRLGVKLPDIAFD
VLLASYLINPDENSNDLGKIAEDHDYHDLPRDEDIYGKGAKRQVPEDDKLFGQFARKSNA
LFALRPDLTGDLEKQAQTDLFTDMEMPLSRVLAEMEIQGITLNAKTLKAMGTEFSQSIKI
LEEKIYAEAGVKFNLNSPKQLGEILFEKLNLPVIKKTKTGYSTSVDVLNELKSASPIVQD
ILDYRGWAKLNSTYVVGLLKAQLPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKI
IRKAFVPSHEGWQIFSSDYSQIELRVLSHISGDENMQEAFKHGVDIHANTAMKIFGLSSP
DQVTPDMRRQAKATNFGIVYGISDYGLSQNIGISRKQAKAFIDGYFDQYPKVHDYMDAMV
KKAREDGYVETLFHRRRYLPQIHSRNFNLRKFAERTAMNTPIQGSAADIIKVAMIRMQKA
LDEAGLQAKMLLQVHDELIFEAPEEEIAQLSELVPKVMDSAVHLDVPLKVESHYGPTWFD
AK
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgactatgacaactaactcaggtcgcggtgacagcagcggccgtagaaaaggaagccca
cttatggcgagcaaaacaaaattattattagtcgatggtaactcagtcgcatttcgtgca
ttttttgctttatataatcaattagaccgttttacgaaccaagatggcttgcacaccaac
gccatttatgcgtttaacaacatgctcgagattgttttaaaggcagtccaaccagatgcc
gctttagtagcatttgatgcaggcaagacgacttttcgcacagccaaatatgctgattac
aaaagtggtcgcgccaagacaccgagcgaattgctggaacaattgccttatatcaaggaa
ttgttggatgacatgggcatcgcgcattatgaattaaaggattacgaagccgatgacatt
atcggcacaatggataagcgtgcggatgaggccggctgggaaacgacgattgtcactggt
gatcgcgatttgacgcagctgacgaccgatcggaccacagttcaagtgacagtgaagggt
gtcaatgagcttgaagcttacaccccagcacatgtcaaagaaaagcttggcatcacaccg
gctcaaattattgatctcaaaggtttgatgggtgatacctcggacaactatcctggggtg
accaaggtcggtgaaaaaacagctctgaaattgctcaatcaatacggaagcatggaaaac
ctctatgctaatgtggatgacatgaaaaagagcaaacttaaagagaatttgattaacgat
aaagatagcgctttcttaagcaaacagttggcaacgatcgatcgcgatgcaccgcttact
gtggacttagcggatgtgacatatgctggaccggatttagacaaactccgggacttctat
acaaaaatgaatatgaattcgttgctcaaaaaaatcggtggtagtgtcgctaaacctgtt
caggcggttcatttttccgtgctggatgagcaatcgattcttgcactcaccaagctgacc
gaacctctgacttttgagattgaaatgctcgaggataattatcatgtggccgaacaaatc
ggtttctttattggcactaaggaagaaacttacgtgagtaccgatatcaccttgctgacg
ctgccagcggttaaacggtggctggaagatgccaaacgagatctgacagtttttgatggc
aaacgaaacatcgtcgccgctaatcgactcggcgtgaaattaccggatatcgcttttgac
gtgttattagcgtcctatttgattaatcctgacgaaaacagcaatgatttgggtaaaatc
gctgaagatcacgattatcatgacttgccgcgtgatgaggatatttatggcaaaggcgcc
aaacggcaagtgccagaagacgataagctgtttggccagtttgctcgcaagtctaatgct
ttgttcgcattgcggcctgatttgactggcgatttggaaaagcaggcccaaacagactta
ttcactgatatggaaatgccgctttctcgggttttggcagaaatggaaattcaagggatt
accctaaatgctaaaacgctgaaggctatgggcactgaattctcacaaagcatcaagatt
ttggaagagaaaatctatgcagaagctggcgtgaagttcaatttgaactcaccaaagcag
ctcggcgaaattctttttgaaaaattgaatctgcctgtgatcaagaaaacgaagaccggt
tactcgacaagcgttgacgtgttgaacgaattgaaatcggcaagtccgattgtgcaggac
attttggattatcgcggctgggcgaaattaaattcgacttatgttgtcggcttgttgaag
gcgcaattgcctgatcataagattcatacccgctatttgcagactttgacgcaaactggc
cgactgagctcagttgatcctaacatgcagaatattcctgctcgtgatgaaggtaagatt
attcgcaaggcctttgtaccgtcacatgaaggttggcaaatttttagttctgactattcc
caaatcgagttgcgggtgttgtcgcatatttccggggatgagaatatgcaggaggcgttt
aaacatggcgtcgacattcacgccaacactgcgatgaagatttttggcctgagttcgcca
gatcaagtcacacctgatatgcggcggcaagccaaggcaactaacttcggtattgtgtat
ggcattagtgactatggtctatcccaaaacattggcatttcccgtaaacaggcaaaagcg
ttcattgatggttattttgatcaatatcctaaggttcatgattatatggatgcgatggtc
aagaaggcgcgtgaagacggctatgtcgaaaccctgttccatcggcggcgctatctgcca
caaattcactcacgcaactttaatctgcgtaagtttgccgagcggaccgctatgaatacg
ccgattcagggtagcgctgcggatattatcaaggtagccatgattcgcatgcaaaaggcc
ttggatgaggccggtttgcaagctaaaatgcttctacaggttcacgatgaactcatcttc
gaggcacctgaagaagaaattgcccagcttagcgagctcgtgccaaaagtcatggactca
gcagttcaccttgatgtgccattaaaggttgaaagtcattatggaccaacttggttcgac
gctaaataa
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