Lacticaseibacillus paracasei W56: BN194_19070
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Entry
BN194_19070 CDS
T02337
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease yhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcw
Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcw03019
]
BN194_19070 (yhaM)
Messenger RNA biogenesis [BR:
lcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BN194_19070 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CCK22854
LinkDB
All DBs
Position
complement(1877322..1878299)
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AA seq
325 aa
AA seq
DB search
MTTLVKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDASDND
IAQFKAGEVVQLSGKRELYQGNPQIKIFSLRLATQEEGNDPKAFVERAPEAPSDMEEELN
SYIFEITNANWNRIVRKLINDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKSVVQQ
YSSLNKSLLYAGAILHDLGKTIELSGPISTDYTVEGNLIGHIVLIDEQIVLAAQQLKIDI
NAEDMLLLRHVVLAHHGLLEYGSPVRPELLEAQVLHDLDELDASINMMTTAYQHVDPGTF
TERLFGMDNRRFYRPKNGQTFPDPH
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccttggtaaaacggcttttcgattatcataatgaagaagatgttcggcttcct
gtgctgattaaatcagctgaagtgcgtgtcgcaaagaatggcaaaaaatttattgcgatg
atttttcaagacaattcaggacatatttcaggtaagttctgggatgctagcgacaatgac
attgctcagtttaaggctggcgaagtcgtccaattgtcgggtaagcgtgaattatatcaa
ggcaatccgcaaattaagattttttcattgcggttggcaacccaagaagaaggcaatgat
cctaaagcctttgttgagcgggcgccagaagcacccagtgatatggaagaggaactgaac
agttacatcttcgaaatcaccaatgctaactggaatcgaattgtccgtaaactgatcaat
gatcacaagaaggcatttttcagttatccggccgccaagtcaaatcaccatgcttttgct
ggtggtctcgcttttcatacgctaagcatcttgcgacttgctaaaagtgtcgttcaacag
tattcgagcttgaacaaaagcttgctatatgcaggcgcaattttacatgatctcggtaag
accattgagttaagcgggccaatctcaactgattacacggttgaaggcaacttgattggt
cacatcgttctcattgacgaacagattgtcttagcagcacaacaacttaaaattgatatc
aacgctgaagatatgctcttactacgtcatgtcgtgcttgcacatcacggattgcttgaa
tacggctcgccggtgcggccagagctgcttgaagcgcaagtgttgcatgatttagacgaa
ttggacgcatcaatcaatatgatgacaaccgcctaccaacatgttgatcctggtaccttc
acagaacgacttttcggtatggacaatcgtcgcttctatcgacctaaaaatggtcaaact
tttccggatccgcactag
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