Lacticaseibacillus paracasei W56: BN194_20360
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Entry
BN194_20360 CDS
T02337
Symbol
gcdB
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw00362
Benzoate degradation
lcw00620
Pyruvate metabolism
lcw00650
Butanoate metabolism
lcw01100
Metabolic pathways
lcw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
BN194_20360 (gcdB)
00650 Butanoate metabolism
BN194_20360 (gcdB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
BN194_20360 (gcdB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcw02000
]
BN194_20360 (gcdB)
Enzymes [BR:
lcw01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
BN194_20360 (gcdB)
Transporters [BR:
lcw02000
]
Other transporters
Primary active transporters [TC:
3
]
BN194_20360 (gcdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
CCK22983
LinkDB
All DBs
Position
complement(2015639..2016763)
Genome browser
AA seq
374 aa
AA seq
DB search
MEALIHGITTITLGQIAMMVIGALLMYLGIKKEYEPTLLVPMGLGAILVNFPGTGVLTQV
VGGTKAEGVLDVLFKAGINTELFPLLIFIGIGAMIDFGPLLQNPFMLLFGAAAQFGIFAT
VFVAVFFGFNIKEAASIGIIGAADGPTSIFVSNQLAPNLLGAITVAAYSYMALVPIIQPM
AIKAVTTKHERRIRMTYKAEGVSKTTKILFPIIITIIAGFIAPISLPLVGFLMFGNLLRE
CGVLDRLSNTAQNELVNIVSILLGLTISVKLQADQFLNIQTLMIIAFGLFAFIMDSVGGV
LFAKLLNLFRKDKINPMIGAAGISAFPMSSRVIQKMATDEDPQNFVLMYAVGANVSGQIG
SVIAGGLLLSFFGA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctcattcacggaatcaccacgatcacattaggtcaaatcgccatgatggtg
atcggcgcgctcctgatgtatctgggaatcaaaaaagaatatgaaccaacccttttagtt
cccatgggcttgggcgccattctggtcaactttccaggaacaggcgtcttgacccaagtt
gttggcggcaccaaagcagagggggtgcttgatgttttattcaaagccggtatcaatacg
gaactgttcccactgctaattttcatcgggatcggcgccatgatcgactttggaccgtta
ttacaaaacccattcatgctactgttcggtgcagcagcacagttcgggatctttgccacc
gtttttgttgctgtcttcttcggtttcaatatcaaagaagcggcttcaattggcatcatc
ggtgccgcagacggcccgacttcgattttcgtttcgaaccaacttgcgccaaatctgtta
ggggccatcacagtcgctgcgtattcgtatatggcattggtgccgatcatccagccaatg
gccatcaaggcagtgaccacaaagcatgaacgccggattcggatgacttataaggcagaa
ggcgtttcaaagacgacaaaaattctgtttccaatcattatcacgattattgccgggttt
attgccccgatttccttaccgttagttgggttcctgatgtttggtaacctgctgcgcgaa
tgtggggtgctcgatcggctgtctaacaccgcgcaaaacgaattggtcaatattgtgtca
attctgcttgggctaacgatttccgttaaattgcaagctgatcaattcttgaacattcaa
acgttgatgatcattgcttttggattattcgccttcatcatggactctgtcgggggtgta
ttgttcgccaaattattgaatcttttccgtaaagataagattaacccaatgatcggggcg
gccggcatttccgctttcccaatgtcgagccgagtgattcaaaaaatggcaaccgatgaa
gatccacagaattttgttttgatgtatgccgttggcgctaatgtttccggccaaatcggc
tctgtcattgccggcggactgttactatcattctttggcgcataa
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