Lacticaseibacillus paracasei W56: BN194_21340
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Entry
BN194_21340 CDS
T02337
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw00521
Streptomycin biosynthesis
lcw00523
Polyketide sugar unit biosynthesis
lcw00525
Acarbose and validamycin biosynthesis
lcw00541
Biosynthesis of various nucleotide sugars
lcw01100
Metabolic pathways
lcw01110
Biosynthesis of secondary metabolites
lcw01250
Biosynthesis of nucleotide sugars
Module
lcw_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
BN194_21340 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BN194_21340 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
BN194_21340 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BN194_21340 (rmlB)
00525 Acarbose and validamycin biosynthesis
BN194_21340 (rmlB)
Enzymes [BR:
lcw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BN194_21340 (rmlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NmrA
Sacchrp_dh_NADP
NAD_binding_10
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CCK23081
LinkDB
All DBs
Position
complement(2107303..2108331)
Genome browser
AA seq
342 aa
AA seq
DB search
MMKLMITGGAGFIGSNFVHFVYRHHPEVQMIVLDKLTYAGNKANIADLLGDRVQLVVGDI
ADKAVVDKWMAKVDTVVNFAAESHNDNSLINPDPFLHSNVIGTYTLLEAARKYDVRFHHI
STDEVYGDLPLREDLPGHGEGPGEKFTVNSRYNPSSPYSSTKAASDMLVHAWARSFGVRA
TISNCSNNYGPYQHIEKFIPRQITNILSRIKPKLYGTGKNVRDWIHTNDHSSAIWDILTK
GKIGETYLIGANGEKDNKTVLELILKLMGKPTDYYDQVKDRPGHDMRYAIDASKTREELG
WKPQYTDFEEGLADTIEWYTEHRDWWQDEKAAVEEKYQEHGQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ataatgaaacttatgattactggcggtgccggcttcatcggctccaactttgttcatttt
gtctatcgtcatcatccagaggttcagatgattgttcttgataagctgacttatgctggc
aacaaggccaacattgcagatcttcttggcgaccgggtgcaattggtggttggcgatatt
gccgataaagccgttgttgacaagtggatggcaaaagttgatacggttgtcaactttgcg
gccgaaagccacaatgacaattccttgattaatccagatccattcctgcatagtaatgtg
atcggtacttatacgttgcttgaagcggccagaaaatacgatgtgcgattccatcacatc
tcaacggatgaagtttatggtgacttgccgttgcgtgaggatttgcctggccatggcgaa
ggtcctggcgagaaattcacagttaacagccgttacaatccttctagcccatattcctca
acgaaggctgctagtgacatgttggtacatgcatgggcacgctcatttggggtgcgggcc
acgatctcaaattgctcaaacaactatggtccctaccagcacattgaaaagttcattcct
cggcaaattacgaatatcctgagcaggatcaaacccaagctttacggcaccggcaagaat
gtccgtgattggattcacactaatgatcattcatctgccatttgggacattttgaccaaa
ggtaagattggcgaaacctacctcattggtgccaacggcgaaaaagacaataagacggtt
cttgaacttatcttgaagttaatgggcaagccaaccgactattacgatcaggtgaaagat
cgtccgggtcatgatatgcggtatgctattgatgcctcaaaaactcgtgaagaactcggc
tggaagccgcagtacaccgattttgaagaaggcttggccgataccatcgagtggtacacc
gaacaccgtgactggtggcaagatgaaaaagctgctgttgaagaaaagtatcaggaacac
ggtcaatga
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