Lacticaseibacillus paracasei W56: BN194_21990
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Entry
BN194_21990 CDS
T02337
Symbol
oppD_3
Name
(GenBank) Oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw01501
beta-Lactam resistance
lcw02010
ABC transporters
lcw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BN194_21990 (oppD_3)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN194_21990 (oppD_3)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BN194_21990 (oppD_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcw02000
]
BN194_21990 (oppD_3)
Transporters [BR:
lcw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
BN194_21990 (oppD_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
FtsK_SpoIIIE
AAA_29
ResIII
AAA_22
AAA_16
DUF87
nSTAND1
Mg_chelatase
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCK23146
LinkDB
All DBs
Position
complement(2175707..2176759)
Genome browser
AA seq
350 aa
AA seq
DB search
MSKILEVKDLQIDFATYAGPVHAIRNVNFDLNKGETLAIVGESGSGKSVTVRTVMGLLAP
NAKITHGEVLFNGEDILKKSEKQLNAMRGNDVAMIFQDPMTSLDPTMTIGKQVAEPLLLH
SKISKADALKEAERVLDLVGIKDAGGRLKDYPHQFSGGQRQRIVIAIAIINHPQILLADE
PTTALDVTIQAQIIHLLKEIQSKIDTSIIFITHDLGVVAGIADRVAVMYAGKIVEYGTVD
EIFYNAQHPYTWGLLEAMPTLETKSDRLYAIPGTPPDLLDPPKGDAFAPRNPYAMAIDLE
QEPPFFKISPTHSAATWLLAPGAPKVELPPEIARRHALWASKHQDEKVVN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaattctagaagtaaaagatttacagatcgactttgccacctatgccggccct
gtccacgccatccgcaatgtcaattttgaccttaacaaaggtgagacgctggctattgtt
ggtgagtctggttctggtaaatccgttaccgtgcgaacggtgatgggtttgttagccccg
aatgcgaaaattacgcatggcgaagtgctgtttaacggcgaggacattctcaaaaaatcc
gagaaacagcttaatgctatgcgtggcaatgatgtcgccatgattttccaagacccgatg
acctcactggatccaactatgaccattgggaaacaagtggcagagccgttgctgttgcat
agtaaaatcagtaaagccgatgcgctcaaggaagctgaacgcgtgttggatttagttggc
atcaaggatgccggcggtcgcttaaaggactatccacatcagttctctggtgggcagcgt
cagcggattgtcattgccattgcgatcatcaatcacccgcagattctgctggctgatgaa
ccaacaaccgctttggacgtgacgattcaggcacaaattattcatctgttgaaagaaatt
cagtcgaagatcgacacctcaatcattttcatcacccatgaccttggcgtagttgctggg
attgccgatcgtgttgcggttatgtatgctggcaagattgttgagtatggtacggttgac
gaaatcttttacaatgcccagcatccgtatacgtgggggttgcttgaagctatgccgaca
cttgaaaccaagagcgatcgactgtacgccattcctgggacaccaccggacttgcttgat
ccgccaaaaggtgacgcgttcgcaccgcggaatccatacgcgatggcgattgacctcgaa
caggaaccgccattcttcaagatctcaccgacccattcggcggcaacttggctattagca
ccaggcgcaccgaaagtggaattaccgccagaaattgcgcggcgacatgccttatgggca
agtaaacatcaagatgaaaaggtggtgaactaa
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