Lacticaseibacillus paracasei W56: BN194_23750
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Entry
BN194_23750 CDS
T02337
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BN194_23750 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcw03019
]
BN194_23750 (groL)
03110 Chaperones and folding catalysts [BR:
lcw03110
]
BN194_23750 (groL)
03029 Mitochondrial biogenesis [BR:
lcw03029
]
BN194_23750 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcw04147
]
BN194_23750 (groL)
Enzymes [BR:
lcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BN194_23750 (groL)
Messenger RNA biogenesis [BR:
lcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BN194_23750 (groL)
Chaperones and folding catalysts [BR:
lcw03110
]
Heat shock proteins
HSP60 / Chaperonin
BN194_23750 (groL)
Mitochondrial biogenesis [BR:
lcw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BN194_23750 (groL)
Exosome [BR:
lcw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BN194_23750 (groL)
Exosomal proteins of other body fluids (saliva and urine)
BN194_23750 (groL)
Exosomal proteins of breast cancer cells
BN194_23750 (groL)
Exosomal proteins of colorectal cancer cells
BN194_23750 (groL)
Exosomal proteins of bladder cancer cells
BN194_23750 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lyx_isomer
Motif
Other DBs
NCBI-ProteinID:
CCK23322
LinkDB
All DBs
Position
complement(2371902..2373545)
Genome browser
AA seq
547 aa
AA seq
DB search
MKTMAKEIKFSEDARAAMLRGVDQLANTVKTTLGPKGRNVVLDKSYGSPEITNDGVTIAK
SIDLEDHYENMGAKLVAEVASKTNDIAGDGTTTATVLAQSIIREGMKNVTAGANPVGIRT
GIEKATKAAVDELHKISHKVNGKKEIAQVASVSSSNTEVGSLIADAMEKVGHDGVITIEE
SKGIDTELSVVEGMQFDRGYLSQYMVTDNDKMEADLDDPYILITDKKISNIQDILPLLQE
IVQQGKALLIIADDVAGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAQLEDIATLTGGT
VISSDLGLDLKDTKLEQLGRAGKVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSD
FDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTAL
VDVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNA
ATDEWEDMAKSGIIDPTKVTRSALQNAASVAALMLTTEAVVADKPDPNANNNAAAGANPA
AGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ataaaaacaatggcaaaagaaattaaattctctgaagacgcacgtgctgcaatgctgcgc
ggcgttgatcagttggcaaacacagttaagacaaccttaggaccaaaaggccgcaacgtt
gttttggacaagagctatggctcaccggaaattaccaatgacggtgtcacaattgcgaag
tccattgacttggaagatcactacgaaaacatgggcgccaagttggttgccgaagttgct
tccaagacaaatgacattgctggtgatggtaccacaaccgcaacggttttggcacaaagt
attatccgcgaaggtatgaagaacgttacagccggtgctaatcctgttggcattcgcaca
gggattgaaaaagcaactaaggctgccgttgacgaattgcacaagattagccacaaagtt
aatggtaagaaagaaatcgcgcaggttgcgtccgtttcttcctcaaatacagaagttggt
agtctgattgctgacgccatggaaaaagttggccacgatggtgtgattaccattgaagaa
agcaaagggattgacactgaactctctgttgttgaagggatgcagtttgatcgcggctat
ctgagccaatacatggttaccgataatgataagatggaagctgaccttgacgatccttat
atcttgatcaccgacaaaaagatttccaatattcaggacattttgccgctgttacaagaa
atcgttcaacaaggtaaggcactgttgatcattgctgacgacgttgctggtgaagcattg
ccaaccttagttctgaacaagattcgtggtaccttcaatgttgttgcggttaaggcccct
ggctttggtgatcggcgtaaggctcaacttgaagatattgctaccttgactggtggtacc
gtgatcagttctgaccttggcttggatcttaaagacaccaagcttgaacaattgggtcgc
gccggcaaggtaacggttaccaaggacaacaccacgattgttgatggcgctggctctaag
gatgccattgctgaacgggttaatatcatcaagaagcaaattgatgacacgaccagtgac
ttcgaccgtgaaaagttgcaagagcgtttggctaagttagctggcggtgttgcggttgtc
aaggttggtgccgctactgaaactgaattgaaggaacgcaagtatcggatcgaagatgct
ttgaatgcgacccgtgccgcggttgaagaaggttacgttgctggcggcggtacagctctg
gtagatgttttgcctgcagttgctgctttgaaagaagaaggcgacgttcaaaccgggatc
aacatcgtgctacgtgcgcttgaggaacctgttcgccagattgctgagaacgccggcaaa
gaaggttctgtcatcgttgaacagctgaagaaggaaaagcaaggcgttggttacaatgcc
gctactgatgaatgggaagatatggctaagtcaggtattattgacccaaccaaagtgacc
cgttctgcattgcaaaacgccgcttccgttgctgctttgatgctgacgactgaagccgtt
gttgctgataagccagatccaaatgcaaataataatgctgccgctggtgctaacccagca
gcaggcatgggcggtatgatgtaa
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