Lacticaseibacillus paracasei W56: BN194_23930
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Entry
BN194_23930 CDS
T02337
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw03030
DNA replication
lcw03430
Mismatch repair
lcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN194_23930 (holB)
03430 Mismatch repair
BN194_23930 (holB)
03440 Homologous recombination
BN194_23930 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcw03032
]
BN194_23930 (holB)
03400 DNA repair and recombination proteins [BR:
lcw03400
]
BN194_23930 (holB)
Enzymes [BR:
lcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN194_23930 (holB)
DNA replication proteins [BR:
lcw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN194_23930 (holB)
DNA repair and recombination proteins [BR:
lcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN194_23930 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
nSTAND3
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
CCK23340
LinkDB
All DBs
Position
complement(2389783..2390763)
Genome browser
AA seq
326 aa
AA seq
DB search
MMTKFLIDSLQPKLVAQFARIIDRKQLAQSYLFVGPKGAGKLALAEWIALRLFCQNVQDG
APCGQCPECERILNHNHPDVMVVKTETQSIKVDDIRGLKQEMSKTGVEGNQRVFVVEDAD
KMTAGAANSLLKFFEEPVPGMTVILTATSKNQLLPTILSRAQVITFQSPDRSAVIAKLEE
GGATSQMARVAGRLTGNVADAQALLASATFQDRVTKVFQLLERLADHDPESFVRVQTQLL
PIAKDADSQRQVLALIGLAYADALNQHFQVTSMQQLDLPAIGVLAQRSSEQLTTALQAIL
TAQVRLSQNVTFQSATEQLMLKLLEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ctgatgaccaagtttttaattgattcgcttcagcctaaactcgtggctcagtttgcgcga
atcattgaccgcaagcaattggcacagtcgtatttgtttgtggggccaaaaggggctggc
aagctggccttggctgagtggatcgccttgcgcctattttgccaaaatgtgcaggatggt
gcgccatgtggccagtgtcctgagtgcgagcgaattttgaatcataaccacccagatgtg
atggtggtcaaaacagaaacgcaaagcatcaaggttgacgatattcgcgggttgaagcaa
gaaatgagcaaaaccggggtcgaaggcaatcaacgtgtgtttgttgttgaagatgctgat
aaaatgacagcaggtgcggcaaactctttattgaaattttttgaggaaccagtgcctggg
atgaccgtgattttgactgcaacctcgaaaaatcaacttttaccgaccattttgtcgcgg
gcgcaggttattacattccaaagccctgatcgctctgccgtgattgcaaagctagaagaa
ggcggagcaacctcgcaaatggcacgagtcgcaggccgattgactggcaatgtggctgat
gcgcaggccttgttggcgtctgcaacatttcaagaccgggtgacgaaggttttccagtta
ctggagcgtttggcggatcacgatccggaaagttttgttcgggtgcagacgcaactgctg
ccgattgctaaagatgctgatagtcagcgtcaagtgttggcgctgatcggcttggcctat
gctgatgcattgaatcaacattttcaggtaacatcaatgcaacaactggacttgccggcg
atcggcgtcttggctcagcgatcaagtgagcaactaaccacggcgctgcaggctatctta
acggcgcaggtgcgattgagccagaatgttacgtttcaatccgcaacagaacagttaatg
cttaaactattagaagggtga
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