Lacticaseibacillus paracasei W56: BN194_24740
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Entry
BN194_24740 CDS
T02337
Symbol
ccpN
Name
(GenBank) Transcriptional repressor CcpN
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
lcw
Lacticaseibacillus paracasei W56
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcw03000
]
BN194_24740 (ccpN)
Transcription factors [BR:
lcw03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
BN194_24740 (ccpN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
GntR
Sigma70_r4
HTH_20
Dimerisation
HTH_24
HTH_Mga
HTH_PafC
HrcA_DNA-bdg
CggR_N
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
CCK23421
LinkDB
All DBs
Position
complement(2478712..2479335)
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AA seq
207 aa
AA seq
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MAVTQLTQRQNKIIQLLKAESPMTGETLATKLNISLATIRADLRLLTTIGILDARPKVGY
AYQGENLLQMDSQKFFQTTIAAILLPPTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGAL
VGLISRKDLLRASFTNRDTTLPASIVMTRMPNVITVSADTSIIAASKLLLKHNVDSLPVV
QNAGDTHVIGKITKNRIFKYLIETLVP
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtggccgtcacgcaactgacccagcgccaaaataaaatcattcagctactgaaagcggaa
agtccgatgacaggggaaacgttggcgactaagctcaacattagtttggcgacaattcgc
gctgatttacggctgttgacaacaattggaatcttagatgcgcgacctaaagtcggctat
gcgtatcaaggcgagaatctgttgcaaatggatagccaaaagttctttcagaccactatt
gctgctatcttactgccgccgacggagattaaattgacgacatcgatggaagaagccgtc
accaaactgtttctagccgacgttggttcattgtacgtattagatgatgatggtgcttta
gttggcctcatctcgcgtaaagatttgttacgagcaagctttactaatcgcgatacaacg
ttaccagcgagcatcgtcatgacccgcatgccgaatgtgattaccgtcagcgctgataca
tcgatcatcgcggccagcaaactgctccttaaacacaatgttgattcgctgccggtagtc
caaaatgctggcgatacccatgtgattggaaaaattacaaaaaaccgaatttttaaatat
ctcattgaaacccttgtcccataa
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