Lacticaseibacillus paracasei W56: BN194_25130
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Entry
BN194_25130 CDS
T02337
Symbol
comA_2
Name
(GenBank) Transport/processing ATP-binding protein ComA
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lcw
Lacticaseibacillus paracasei W56
Pathway
lcw02010
ABC transporters
lcw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
BN194_25130 (comA_2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BN194_25130 (comA_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcw01002
]
BN194_25130 (comA_2)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcw02000
]
BN194_25130 (comA_2)
Peptidases and inhibitors [BR:
lcw01002
]
Cysteine peptidases
Family C39
BN194_25130 (comA_2)
Transporters [BR:
lcw02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
BN194_25130 (comA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_24
ABC_ATPase
AAA_29
AAA_22
AAA_18
AAA_33
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CCK23460
LinkDB
All DBs
Position
complement(2516595..2518604)
Genome browser
AA seq
669 aa
AA seq
DB search
MGIVRAAQALHFETKAVKADMTLFDLDDVPYPFLVHVLKRGELLHYYVVFKATKDHILIG
DPDSSVAMTWLPKERFAKEWSGVAIFIAPEPQYQPRKEDKGSLFAFVPMLARQKGIIANI
IVAAVLITLISIVGSYFLQSIIDTYIPNGMRTTLGIIASGLILAYVLQSVLTYGQNFLMA
VLGQRLSIDVILGYVRHLYELPMSFFSTRRTGEIVSRFSDANKIIDALANTIMTLFLDIW
IVLILGIVLGIQNTTLFLVSLIAVPCYLVIVFAFQRPFNRLNQETMESNAILSSSIIEDL
NGIETIKSLTGEKVSYERVDREFVTYLKKSFNYTKADQLQQAIKGLLKLVLNVVVLWIGA
SLVMANKMSLGQMLTFNALLAYFTNPLESIINLQPKLQMAKVANNRLNEVYLVESEFKEQ
RSLNDRHLIDGAINVTDVSFKYGFGQDVLKQINLEIPENAKYTIVGMSGSGKSTLAKLLV
GFYPVDTGKGKITFNGVPISDVDLTTLRQYIEYVPQDPFIFSGSVIENLTLGSRSNITEA
DIEAACSVAEIAGDISNLPQIWQTKLSESGSILSGGQKQRLAIARALLSPAKVLIFDEST
SSLDTITERKIVDRLLAMTDRTIIFVAHRLTIAAKAEQIVVMDHGAIVEQGNHAELLAKQ
GYYARLVSE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
attgggattgtccgcgctgctcaggcgcttcattttgaaaccaaggctgtcaaggcggat
atgacgctgtttgatcttgatgatgttccttatccgtttcttgtccatgtcttgaagcgt
ggcgagttgcttcattattatgtcgtgtttaaggcgacaaaggatcatatcttgattggc
gatcctgattcatcagtagcgatgacctggcttcccaaagagcgctttgcgaaggagtgg
tcgggggtcgctatttttattgcgccagaaccgcaatatcaaccacgcaaagaggataaa
ggcagtctctttgcgtttgtgccgatgctagcgcgacaaaagggaatcattgccaatatt
attgtcgccgctgtgttgatcacgttgattagtattgtcgggtcttattttcttcagtcg
attattgatacttatattccaaacgggatgcgcacaactttgggaatcattgccagtggc
ctcatcctcgcttatgtcctgcagtcggttttaacctatgggcaaaattttttgatggct
gttttaggacagcgtttgtcgattgatgtcattttgggttacgttaggcatctttatgaa
ttaccgatgtccttcttttccacgcgtcggactggggaaattgtgtcgcgcttttccgat
gctaataagattattgatgcgctggcaaacacaattatgaccttgtttcttgatatttgg
attgtcttaattttagggatcgtgttaggcattcaaaacaccaccttattcttggtgtct
ttaattgctgtgccttgttatttggtgattgtgttcgcttttcagcggccatttaatcga
ctgaatcaagagacgatggaaagcaatgccattttgagttcatccattatcgaggatttg
aacgggattgagacgattaaatcactgaccggtgagaaagtcagttatgaacgggttgac
cgtgaattcgtcacttatttgaaaaagtcgttcaattatacaaaagctgatcaactgcag
caggcgatcaagggactgctgaagttggttttgaatgtggtcgtgttgtggattggtgcg
agtttggtgatggctaacaagatgagtctaggacagatgctgacgttcaatgcgttgttg
gcatatttcactaatccgttagaaagcatcattaatttgcaaccaaaattgcaaatggcc
aaagtcgcgaataaccggctgaatgaagtgtatttggttgaatcggagtttaaagaacag
cgaagtttgaatgatcggcatttaattgatggcgccatcaatgttaccgatgtgtccttt
aagtatggttttgggcaagatgttttgaaacaaatcaaccttgaaatcccggagaatgcc
aaatacaccattgtcggcatgagtggatcagggaaatcgaccttagccaagttgctagta
ggtttctatccagtggacactggcaaagggaaaatcacatttaatggtgttcccatcagt
gatgttgatctaacaacgttacgacaatatatcgagtatgtaccacaagatccgtttatt
ttttctggctcagtcattgaaaacttaacgttgggtagccgttcgaatatcactgaagcc
gatattgaagctgcctgttcagtggcggaaattgccggagatatttcgaatttgccgcaa
atatggcagaccaaactttctgaaagcggcagtattttatcgggtggacaaaagcagcgc
ctagcaattgcccgtgcgttattatcaccggcaaaagtgttgatttttgatgaatcgacc
agcagtttagatacgatcaccgagcgaaaaattgttgatcggttgttagcgatgactgat
cgaaccattatttttgtggctcatcggctcactattgctgctaaagcggaacagattgtg
gtcatggatcatggtgcgattgttgaacaaggaaatcatgctgagttattggccaaacaa
ggctattatgctcgattggtaagcgagtga
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