Lacticaseibacillus casei 12A: LCA12A_0134
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Entry
LCA12A_0134 CDS
T03665
Name
(GenBank) IS3 family transposase
KO
K07485
transposase
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LCA12A_0134
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_ISL3
HTH_Tnp_ISL3
Zn_ribbon_ISL3
HTH_23
Viral_helicase1
HTH_28
MULE
Globin
HTH_38
HTH_AsnC-type
MarR_2
HTH_24
Motif
Other DBs
NCBI-ProteinID:
EKP98022
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Position
1962886..1964130
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AA seq
414 aa
AA seq
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MSQYDPTLSVLGIPDHNIKVAFVRHEYRGNGVRRRQYHVIDAELTYRLTRCPLCGFEALH
PNGFYTAHVRVLNGVEIPTVIDLHKQRWRCHNCYHTVSAKTPLVQPNHTIAAHMTERIMK
LAHERLPVKTIARIIGISASSVQRIIDQNLKLRPARRLPTRLCFDEFRSTHGMMSFICLD
ADSHRLIALLGDRCNRTIKNFFIAHYSLADRTRVQTVTMDMNAAYQTIIHEVFPKAQVVI
DRFHIIQLAARALDQVRVQALKQLDDKHSRPYKIMKTNWRLFHQTAPDAKHKQFLFGLNE
YVTQQEAIDIALDTEPKLKQTYETYLALHDALMVKKHPAELANLLATYEPNGTAMDMTIA
TLKRHKVAVLAAVTSPYSNGPIEGVNRLIKSLKRSCFGFKNQLNFFKRIYQITA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatacgatcctacactgtccgtccttggaataccagaccataatatcaaagta
gcctttgttcgtcatgaatatcgcggcaacggggtacgtcgccgccagtatcatgtgatt
gatgccgagctgacttaccggttaacccggtgcccactgtgtggctttgaggccttgcac
cctaacgggttttatacggcccacgtgcgcgtcctcaacggggttgaaataccgacagtc
attgacttgcacaagcaacgatggcgctgtcataactgttaccacacagtcagtgccaag
acgccactcgtgcaacccaaccacacgatcgccgctcacatgacagagcgaatcatgaag
ttagcgcatgaacggttgccagtcaaaaccatcgcccgtattatcggaatctcagcttcc
tcggttcaacggatcattgaccaaaatctcaaactccgaccggctcgccggctacccacg
cgactctgctttgatgagttccgttccactcatggcatgatgtcgtttatctgtcttgat
gccgattcacatcgtctgattgccttgcttggtgatcgatgcaaccgcacgattaaaaac
ttcttcatcgctcattattcactcgctgaccgcactcgggtccagacggtcaccatggac
atgaatgcagcttatcaaacgattattcatgaggttttccccaaggcccaagtcgtcatt
gatcggttccatatcattcaacttgcggctcgtgcccttgatcaggtacgcgtccaagcg
ctcaaacagcttgatgacaaacacagccgtccttataagatcatgaagacaaactggcgg
ctttttcatcaaaccgcgcctgacgctaaacacaaacagttcctgtttggtttgaatgaa
tacgtcacgcaacaggaggccatcgatatcgcacttgatactgagcccaagctcaagcaa
acctacgagacctacttagcacttcatgatgctttgatggtgaagaaacatcccgcggaa
ctggcaaacctgttagctacttacgagccaaacggtacggcaatggacatgacgatcgcg
acgcttaagcgacacaaagtcgctgttctcgccgctgtcaccagcccttattccaacggt
ccgatcgaaggcgttaaccgcctcatcaagtcactcaaacgatcctgttttggcttcaag
aatcagctgaacttcttcaaacgaatctaccaaatcacggcataa
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