Lacticaseibacillus casei 12A: LCA12A_0178
Help
Entry
LCA12A_0178 CDS
T03665
Name
(GenBank) periplasmic-binding component of an ABC superfamily oligopeptide transporter
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx01501
beta-Lactam resistance
lcx02010
ABC transporters
lcx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCA12A_0178
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCA12A_0178
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LCA12A_0178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcx02000
]
LCA12A_0178
Transporters [BR:
lcx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LCA12A_0178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
EKP97603
LinkDB
All DBs
Position
complement(2035084..2036706)
Genome browser
AA seq
540 aa
AA seq
DB search
MKFRKTMVAGSALALAGVLAACGSNSSSSSKGTSITRMESDVISTMDPSTTTDAISGQAL
IDTMDGLYRYNGSKLENAMAKSQPTVTDGGKTYTFKLRNAKWSNGDPVTAQDFVFAWRRT
VEPKTKSQYAYLYSGVKNADDITAGKKAASTLGVTAVNKTTLKVTLDHAIPYFKTMLVNP
AFFPQNEKFVEKSGKKFGTTSKYILSNGPYQLKNWNGTGNTWKETKNTTYWNAKNVHIDT
LNGQVVKDSQTAMNLYQSKKLDIAALQGEQAAQAKSMSDFKGLKQSATFYLELNEKKDPI
FKNTKIRQAISMSIDREAYIKKVLNDASIAANNVTPEGLFEKNGQDFSKTASKAESSAVK
YDPAKAKELWTEGLKEVGQSAPTLELLTDDTTNAKRSAEYFQSTLQQNLPGLKVTIATVP
FKTRLSRSQNGQFDMVISAWSADFPDAISFLDLFTSDNSYNDGKWSNAEYDALIKQSKTT
DATNATARWNTLLKAQELLTKEQGVVPLYQRVQTTLQRKTITGLNYNPTNSYNFVNAKVK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagaaagacaatggttgcgggctctgcgctcgcgcttgcaggggtgttagca
gcctgtggttctaattcttctagcagcagtaaaggtacttcgattacacggatggagagt
gatgtgatctccacgatggatccatcaacgaccaccgatgctatttctggtcaggcattg
attgataccatggatggcttgtatcggtacaatggcagcaaattggaaaatgccatggcc
aagagtcaaccaactgttactgatggcgggaagacctataccttcaagttacgtaatgct
aaatggagtaacggtgatccagtcacagcccaagattttgtgtttgcttggcggcggacg
gttgaaccgaagaccaagtcgcaatacgcctacctatattcaggcgttaaaaacgctgat
gacatcacagccggtaaaaaagcggccagcacgcttggggttaccgccgtcaacaagacg
actttgaaagtcaccttggaccacgcgattccttatttcaagaccatgttggttaaccca
gcattcttcccacaaaatgagaaattcgttgaaaaatctggtaagaaattcgggactact
tccaagtacatcttgtccaatggcccttaccagttgaagaactggaacggcactggtaac
acttggaaagaaactaagaacactacttactggaatgctaagaacgttcacatcgatacc
cttaatggtcaagttgttaaggattcgcaaaccgcgatgaacctgtatcagtcgaagaaa
cttgatatcgcagctttgcaaggtgaacaagcggctcaagcaaaatccatgtctgatttc
aaaggcctcaagcaaagtgcgaccttctatcttgaattgaacgagaagaaggatccaatc
tttaagaacaccaagattcgtcaggcaatttccatgtctattgatcgcgaggcatacatt
aagaaggttctgaatgatgcttccatcgcggccaacaatgtgacccctgaaggattgttc
gaaaagaacggtcaagacttctccaagacggcatctaaagctgaatcctccgctgttaag
tacgatccagccaaggctaaagagttgtggacagaaggtttgaaagaagtcggtcagtcc
gcaccaactttggaactgctgacagacgatacgaccaatgctaagcgttctgccgaatac
ttccagagcaccttgcaacagaacctgccaggtctgaaagttaccatcgctacagtacca
ttcaagacgcgtctatctcgttcccaaaatggtcagttcgatatggttatctccgcttgg
agtgctgatttcccagatgctatttccttcttggatctgttcacctccgataacagttac
aacgatggcaagtggtcaaatgctgaatacgatgctttgatcaagcagtccaagacgacc
gatgcgaccaacgcaaccgctcgttggaacaccttactcaaggcccaagaactgttgacg
aaggaacaaggcgttgtaccgctgtatcaacgggtacaaacaaccttgcagcgtaagacc
attaccggtttgaattacaacccaaccaattcctataactttgtgaatgcgaaagttaag
tag
DBGET
integrated database retrieval system
