Lacticaseibacillus casei 12A: LCA12A_0476
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Entry
LCA12A_0476 CDS
T03665
Name
(GenBank) 3'-to-5' oligoribonuclease A
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx00920
Sulfur metabolism
lcx01100
Metabolic pathways
lcx01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
LCA12A_0476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_0476
Enzymes [BR:
lcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
LCA12A_0476
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
LCA12A_0476
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
LCA12A_0476
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
gag-asp_proteas
Motif
Other DBs
NCBI-ProteinID:
EKP96342
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Position
2764068..2765000
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AA seq
310 aa
AA seq
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MSTETDSILAAFEKFNTIIIHRHINPDPDAIGSQTGLALLLRAAYPAKTIYTAGPAAPDL
AWIGPQQQVSAEAYTGALVVVIDTSNRERIAGDYFDQGAMLIKIDHHLDEDQLGTINWVD
THASSASEMVWDLVRHSPQLQLTKAAATALYAGIIGDTGRFLYDLTTARTHQAAADLLAT
GIDAAAIGRQEDQFPENVGRLIGWALENVKITDTGAGSLLITKAVLAQFGLAYGEEQRAI
GNIGKLASIDRWVVFTERTDGSYRVELRGKTKEINTLAVQHGGGGHPLASGAVADNAAEL
HAIEEELASL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaaactgacagcattttagctgctttcgaaaaattcaacaccattattatc
catcgtcatattaatcctgaccctgatgcgattggctcacaaaccggattggccttgctg
ctgcgtgccgcttatcctgccaaaaccatctacacagcgggaccggccgcccccgattta
gcttggatcggaccacaacaacaagtgtccgctgaagcttacactggtgcgctcgtcgtt
gtgattgatacttctaatcgcgaacgcattgccggtgattattttgatcaaggagcgatg
ctgatcaaaattgaccatcatctggatgaagatcagcttggcaccatcaactgggttgac
acccatgcttccagtgcatcagagatggtgtgggacttagtacgtcacagcccacagctg
caactcaccaaagcagccgccacagcactctacgcaggcattattggtgacaccggccgt
tttctgtatgatttaacaaccgcccgcacccaccaagctgctgctgacctacttgcaacc
ggcatcgatgccgccgcaattggccgtcaagaagaccagttcccggaaaatgttggccgc
ttgattggttgggccttagaaaatgtcaaaatcactgacactggcgccggatcactcctc
atcacaaaggccgtgctcgcccaatttggccttgcgtatggcgaagaacagcgcgcaatc
ggcaatatcggcaagctagccagcattgatcgctgggtggtcttcaccgaacgaactgat
ggcagctatcgggttgaactccgcggcaaaaccaaagaaatcaatacgctggccgttcaa
catggtggtggcggccatccgctggcaagcggcgccgtggcagataatgctgctgaactt
catgctattgaagaggaacttgcatcgttataa
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