Lacticaseibacillus casei 12A: LCA12A_0768
Help
Entry
LCA12A_0768 CDS
T03665
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCA12A_0768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_0768
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LCA12A_0768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
AAA_14
AAA_28
nSTAND3
Rad17
Motif
Other DBs
NCBI-ProteinID:
EKP97396
LinkDB
All DBs
Position
complement(2202483..2205065)
Genome browser
AA seq
860 aa
AA seq
DB search
MNFVPQKTSETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELTLTARNK
SADDPIPMAGVPHHAVQSYVDILIDHGYKVAICEQMEDPKKAVGMVKRAVIQLVTPGTNV
DIKAGAAKSNNYITAVMPHAAGYAFAYADVSTGELKVTDLKSKFALQNELSALATKEIVV
PEELTDDDAGMLKQGERLLSVQPDAEPTSEGSYVSQALTDPAEAAVVQMLMAYLLNTQKR
SLAHIQKAVAYQPSAYLEMDQDARSNLDILQNSRTGRKGDTLLSLLDSTKTAMGGRLLKQ
WLDRPLLDIDAISVRQNQVQDLLDHFFERSELQERLTKVYDLERLAGRVAFGTVNGRDLI
QLQTSLGQIPAIQDVLGKLDDGSFKALRSKMDPVSDVAGLIRRAIEPEPPISVTDGGLIL
RGYNQKLDSYRDAMKNSKQWIAELEASERKATGIHTLKIRYNKVFGYFIEVTKSNLDKIP
EGRYERKQTLTNAERFITPELKEKETLILEAQESSTALEYDLFQDIRDKVKAQIKRLQAL
AAQISSLDVLQSFATVAENSHYVRPTMHAGTHDINVKGGRHPVVEHVLGRDSYIPNDVIM
NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQAGSFVPADVADLPIFDQIFTRIGAADDL
ANGESTFMVEMLEANAALSHATASSLILFDEIGRGTATYDGMALAQAIIEFLHDHVHAKT
LFSTHYHELTSLSDSLAKLKNVHVGAVEEHGNLVFLHKMMPGPADKSYGIHVAKLAGLPA
DLLARADTILKQLEADAPNKTAPAPAPQVEEQQLSLFEEPKPTPKNSPILTKLAKFDLMA
ATPMDAMNFIFDLQKHLKKK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttcgtgccgcaaaaaaccagtgaaacgcctatgatgcagcagtacaacgaaatc
aaggcgcaatatccggatgcgtttttgttttaccgcatcggagatttttatgaattgttc
aatgatgatgccatcaaaggtgctcagttgctcgaactaacattaactgcacgaaacaag
agtgctgacgatcctatcccaatggctggtgtcccgcaccacgctgtccaaagttacgtt
gatattttaattgaccacggttacaaagttgcgatctgtgaacagatggaggaccctaaa
aaagctgtcgggatggttaaacgagccgtcattcagttggtaacgccagggacaaatgtt
gacatcaaagccggtgcagccaagtcgaataactatattaccgctgtgatgccgcatgca
gcaggttatgcgtttgcgtatgccgatgtatcgaccggtgagctcaaagtgacggatcta
aaaagcaaatttgctctgcaaaacgaactgagtgcgctggccaccaaagaaatcgttgtg
cctgaggaattgaccgatgacgatgcgggaatgctcaagcaaggggaacggcttctgtca
gtccaaccggatgccgaaccgacgagtgaaggcagttatgtgtcacaggcgctaaccgat
cctgcagaggctgccgttgtgcagatgctaatggcctatttattgaacacgcagaaacgc
agcttggcccatattcaaaaagcggttgcttatcaaccttccgcctatctggaaatggat
caggacgcccgtagtaacctcgacattttgcaaaacagcagaacgggacgaaaaggtgac
actttgttgtcgttgcttgattcgaccaaaacagcgatgggtggccgcttattgaaacaa
tggctggatcgaccattactggatattgatgcgatcagtgtgcggcaaaatcaggttcag
gatttattggatcacttttttgaacgcagtgagttgcaggaacgactaactaaagtctat
gatcttgagcggttagctggccgagttgcttttggtaccgttaatggtcgtgatttaatt
cagttgcaaacctctttgggtcagatcccggctattcaggatgtgctgggtaagcttgat
gatggcagttttaaggcacttcgcagtaaaatggacccagtcagcgatgtcgctggatta
attcgccgtgcgattgaacccgaaccgccgatttcagtgacagacggtggcttgatcctc
cgagggtacaatcaaaaactggacagctatcgtgatgccatgaagaattccaaacaatgg
atcgctgaactagaagcatcggaacgcaaagcaactggcattcacacacttaaaattcgt
tacaacaaggtttttggttactttatcgaagtgactaagtccaatttggacaaaataccg
gaagggcgctatgaacgcaaacagacactgacaaacgctgaacggtttatcaccccagag
ctgaaagaaaaggagaccttgattcttgaagcgcaggaaagctcaacagcgctcgagtat
gatcttttccaagacattcgcgacaaggtcaaagcccagatcaaacgactacaagcttta
gccgcccaaatttcatctttggacgtgttgcaaagctttgcaacagtggctgaaaacagt
cattatgtccgaccaacgatgcatgccgggactcatgatatcaatgttaagggtggtcgc
cacccagtcgtggaacatgtacttggccgagacagttatattcctaacgatgtcatcatg
aatcacgacaccgatatgttgctgatcaccgggcctaacatgtcagggaaaagtacctac
atgcgccaattagccttgattgttatcatggcgcaagcgggttcgtttgtcccggcagat
gtagctgacttaccgatttttgatcagatctttacccgaatcggagcagctgatgatctt
gccaatggcgaaagtactttcatggttgaaatgctggaggccaatgctgcattaagccac
gcgacggcttccagcctgattctttttgatgagatcggccgcggcacggcaacgtatgat
gggatggcgctggcacaggcaattattgagtttttgcatgatcatgtccacgccaaaact
ctgttctcaacgcattatcatgagctaactagtttgtcagattccttggcgaagttaaag
aatgtccatgttggtgccgttgaggagcatggcaatctggttttcttgcacaaaatgatg
cctggccctgccgataagagttatgggattcacgttgccaagctcgccggcttaccggca
gacttgttagcgcgtgctgatacgattttgaaacagcttgaagccgatgcacccaataaa
acggcaccagcaccagcgccgcaagttgaagagcaacaattgtcgttgtttgaagaacca
aaaccgacgccaaagaatagtccgattctgacgaaacttgcgaaatttgacttgatggcg
gccacaccgatggacgcgatgaatttcatatttgacctgcagaagcatttaaagaagaag
tga
DBGET
integrated database retrieval system
