Lacticaseibacillus casei 12A: LCA12A_0793
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Entry
LCA12A_0793 CDS
T03665
Name
(GenBank) MutS2 family recombination inhibitory protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LCA12A_0793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_0793
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LCA12A_0793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
ATG17_like
Spectrin_SESTD1
AAA_21
DUF3053
AAA_22
LprI
AAA_14
PRKCSH-like
PIN_8
Motif
Other DBs
NCBI-ProteinID:
EKQ00841
LinkDB
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Position
740927..743287
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AA seq
786 aa
AA seq
DB search
MNEKILKTLEYDKIQQALLGQVVTANGRQLVQAMQPLTDPVAVQQALDETADGASALRLK
GGIPVPQLENIDPALKRVDIGAVLNGQELASISRVLQTVSAIDKFLTDLQDQIDFRQLYT
LQESLTVLPQLSRRLKTAVDPDGTLTDEASPQLHGVREQIKSIEGEIRGKMTNYTRGAQS
KYLSDPIVTIRDDRYVIPVKAEYRAKFGGVVHDQSATGQTLFIEPQAIVALNNRLREAQL
AEVAEINRILAELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPLVSADNDV
LLRDARHPLIDPHKVVGNDIPLGDKYQAMVITGPNTGGKTITLKTLGLLQLMGQSGLFIP
ADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSQNSLVLFDELGAGTD
PQEGAALAIAILDAVGEVGAYVVATTHYPELKLYGYNTAKTINASMEFDSKTLQPTYRLL
VGVPGRSNAFDISARLGLPGVIVERAKSMISSDSHELNNMISDLEKQRKAAETAYEAARR
QLADAQSVHDELAAAYKKFTTERDAQLQQAKDKANSLVDKAQTKADKIIKQLRQMQLTNP
GTVKENQLIAAKTALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASYDQTGTLLEQF
DKKHWQVQLGILKMKVPTDELEKIKPSKQSAAQRPVVKVSGGGMSGPSTTLDLRGERYDQ
AMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYGFAPQNAGGSGA
TIVNFK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagattttaaaaacccttgaatacgacaagattcagcaggcattgttgggt
caggtcgtgacagcaaatggccgccagctggtgcaggccatgcagccgctgaccgatcca
gtcgccgtacaacaggcactagatgaaaccgcagacggcgcatcggcgttgcgattaaaa
ggcggtattccggtgccgcaactcgagaatattgatccggcgcttaaacgagtcgacatt
ggggccgttttgaatggtcaagaactagccagcatcagccgtgtcttgcaaacggtgagt
gccattgataaatttttgactgatttacaggatcagattgattttcgccagctttacaca
cttcaagaatcgttaaccgtgttaccgcaattatcacggcgcttgaagacagccgttgat
cctgatgggacattgaccgatgaggctagtcctcagttgcatggtgttcgtgaacagatc
aaaagtattgaaggcgagatccgcggtaaaatgacaaattatactcgcggcgcccaatca
aagtatttaagtgacccgattgtgacgattcgggatgatcggtacgtgattccggttaag
gctgagtatcgcgccaaatttggcggtgttgtccatgatcaaagtgcgaccggccaaacc
ttgtttattgaaccgcaagcaattgtcgccttgaataatcgactgcgtgaggcacaactg
gccgaggtagctgagattaaccgcatcttagccgaattgtctaatgaattagcgccttat
accggtcaaatcaaggcgaatgcggcggttcttgggcattttgacttcatcaatgcgaag
gcgagattagccaaggcggaaaaagcgacagagccgttagtgtcggctgataatgacgta
ttgttgcgtgatgctcggcaccccttgatcgatccgcataaggtggttggcaacgatatt
ccgttgggcgacaagtaccaagctatggttatcaccggcccgaataccggtgggaaaaca
atcaccctcaaaacattaggactgttgcagttgatggggcagtccggattgtttattcca
gctgatgatgaaagtcgtatcggcattttcgatgaagtctttgcagatattggcgatgaa
caatccattgagcaaaatttgtcgactttttctgcacatatggacaatattgttcatatt
ctcaaacaattgtcacaaaatagtttagtgctgtttgatgaacttggcgccggcactgat
ccgcaagaaggtgcggcgctggcgatcgcgatcttggacgcagtgggtgaagttggcgcg
tatgtggttgccacgacccattatccggaattgaagttgtatgggtacaatacagcaaag
acgattaacgcatcgatggaatttgacagcaaaacgctgcagccgacttatcgccttttg
gtcggggtacctgggcgctcaaatgcgtttgatatttctgcacgtttggggctgccgggc
gtgatcgttgagcgtgctaagtcaatgatcagctcggacagccatgagctgaataatatg
atcagcgacttggaaaaacagcgaaaggcagcggaaaccgcttatgaagccgctcgtcgt
cagctagccgatgcacagtctgtccatgacgagctagcggcagcctacaagaagttcaca
acggaacgcgatgcccagttgcagcaggctaaggacaaggccaactcgttggttgacaag
gcccaaacgaaggcagataaaatcatcaagcaactgcgccaaatgcaattgacgaatccg
ggaaccgtgaaagagaatcaattgattgctgccaaaacggcgcttaaacaattgcatcaa
gacgagccgcttcagaaaaatcgcatcttgcgccgtgaacgtgagaaacaggcattgcat
gttggtgatgaggttaaagtggcaagttacgatcaaactggtaccttgctggagcaattc
gataagaagcattggcaggttcaactaggcattttgaaaatgaaggtaccaactgatgag
ctggaaaaaatcaagccaagtaagcaatcagcggcgcaacgtccggttgtcaaagtaagt
ggcggcgggatgagcggcccatcgaccacgctggatttgcgcggcgagcggtatgatcag
gcgatggcagatttggatcaatacattgatgccgccttattggccggttatccatctgtg
acgattattcacggactgggcactggcgcgattcgcaacggggtgacccagtatcttaaa
cgcaatcggcaggttaaaacgtatggctttgcaccacaaaatgccggtggttcaggagct
accatcgtaaactttaagtag
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