KEGG   Lacticaseibacillus casei 12A: LCA12A_0826
Entry
LCA12A_0826       CDS       T03665                                 
Name
(GenBank) DinG family ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lcx  Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:lcx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lcx03400]
    LCA12A_0826
Enzymes [BR:lcx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     LCA12A_0826
DNA repair and recombination proteins [BR:lcx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LCA12A_0826
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD RNase_H_2 DEDDh_C AAA_22
Other DBs
NCBI-ProteinID: EKP99201
LinkDB
Position
complement(1455410..1458196)
AA seq 928 aa
MNAETIFAVVDLETTGTSVKDGDRMIQFGCALMQHGKIIQTISQLVNPDRSVPVAIQRLT
GLDPNRLVAAPYFEEIAKTLHQLLTDTVFVAHNVNFDYPFLNAEFERVGLPKLQLAAIDT
VELAQILLPEISSFRLPDLTSYLQIEHDNPHQADSDAISTAKLLRQLAARFQALPSPTQQ
ALVARGSGLLRETGDYLKAIAKPLKPLKRGFVQVGPLVLRRVPTATQETFAPAAYPATDL
EKRHLLQPRYRFRKAQARMMDAVFAHAQEGGPQPLFIEAGTGLGKTLGYLLPYAYVATAE
HKLVVATSTLVLQSQLIQTAIPTLAAVLGRDLPAVEVKSPQHYIDLNKFAASLHQESPSR
QTQLLQMKLLVWLTQTTTGDLDELHLTTYRAPLFMQIRHTGDSGTPFINPYYTLDFYRRL
RASIDRAAIVVTNHAFLSRHADLLDLEAPFLVVDEAQHFADNTAAAFAQRIDLAQIRRQL
RHLWRLSDPDEDRSLVNVYQNDRQMLPVLAQLNALTTTAQETIETLQHQIYRHFFNGKTT
ADQGFVSLSLDQAAINWLVTSQTDNIKTLIKVIGRIQVIATKLDADFNGRQHFFLKSDGQ
RFQALAALTVTLIDQRDRLKLLLARLPELVAGQTAVASLTLRQMHDVSSLGLSWDIFQVG
SAIQQLLQRFTAPVFVGATLTTDRSFDFLTAQLGYLDLPETAFLKLRSPFHYRDQAKVLV
ATDAPAAGAVSAEAYADYLAAAIELLADNRHQTIVLFNSLATIAAVYQRLAHRPIADHKE
LLAQGVTGSAEKIAKRFAVGDQSLLLGAASFFEGIDYPDRLLEMVILTRLPFDAPEAAIT
KARYERLQAAGRDPFTEDALPRATLRLRQSFGRLIRTETDRGIFVVLDPRFITTRYGRKM
QKSLPNIKPMTLPLTDMPGYIKMWLDRA
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgaatgctgagaccatttttgctgtggtcgatttagaaacaactgggaccagcgtcaaa
gacggcgaccggatgatccagtttggatgtgccttaatgcagcacggcaaaattatccag
acaatttctcagttggtgaatccggatcggtcggtaccagtggcaattcagcgactaacc
ggcttggatcccaatcgattagtcgcggccccttattttgaagaaatcgccaaaacgttg
catcagctgttgactgatacggtttttgtagcgcacaacgttaatttcgattatcctttt
ttaaatgcggaatttgagcgagtggggctgccaaagctgcaattagctgcgatcgacacg
gttgaattggcgcaaattttattgcctgagattagcagttttcgcttgcctgatttaacg
agttacttacaaattgagcacgataacccgcatcaagccgatagtgacgcgattagcacg
gctaaattgttgcgccagctggcggctcgctttcaggccttgcccagtccgacgcaacag
gcgttggttgcgcgcggcagtggcttgttgcgggaaaccggcgattatttgaaggcaatc
gctaaaccgttgaaaccgttaaaacgcgggtttgttcaagttggcccgttggtcttgcgc
cgagtgccgacagcaacccaggaaacgtttgcgccagcagcttatccggcaacggatctt
gaaaaacggcacttgctccaaccgcgctatcgcttccgcaaggcccaggcgcggatgatg
gatgcggtttttgcacatgcacaagagggtggtccccagccacttttcattgaggcagga
accggtctgggcaaaacgcttggatatttgctgccttatgcttatgtcgcaaccgccgaa
cataagttagtggttgcgacatcaacgcttgttttgcaaagccaactaattcagacggcc
attccgactttagccgctgttttaggcagagacttgccagcagttgaggttaaaagtccg
caacattatattgatctcaacaagttcgcggctagtttgcatcaagaatcaccaagtcgg
caaacgcagttattgcaaatgaaattgctggtttggttgacacaaacaaccacaggtgac
ctcgatgagttgcacttaacaacttatcgagcgccattgttcatgcaaattcggcatact
ggtgattcaggcacaccgtttatcaacccgtattacacacttgatttttatcgacggctg
cgtgcttccattgatcgggcggctatcgtggttacgaatcacgcttttctgtcacgccac
gctgatttgttggaccttgaggcgccatttctggtcgttgatgaagcgcaacattttgct
gataataccgccgctgcctttgcgcaacggatcgacttagcgcaaattcggcggcagttg
cgacatttgtggcgattgagtgatcccgatgaagatcgctcattggttaacgtctatcaa
aatgatcggcagatgctgcctgtgttggcgcaacttaacgctctaacaacaacggcccag
gaaacgattgaaaccctgcagcaccaaatatatcggcatttctttaacggcaagacaacg
gctgatcaagggtttgtgagtctgagcttggatcaagctgctattaattggttagtcacg
tcccaaacagacaatattaagacattgatcaaagtcattggtcgcattcaggtcattgcg
actaaactagatgcagatttcaatggccggcaacatttctttttgaaaagtgacggtcaa
cgatttcaagccttagccgcgttgacagtcaccttgatcgatcaacgtgaccgcttgaaa
ttactgttagcgcgcttgccagaactggttgccggccaaactgccgtggcttccttgacg
ttgcggcaaatgcatgatgttagcagtcttggcctaagttgggacatttttcaggttggg
tcagccattcagcagttgctacagcggtttacggcaccggtgtttgtcggggcgacttta
accactgaccgttcgtttgactttttaaccgctcagcttggttaccttgacttaccagag
acagcttttctaaagttacgcagtccttttcattatcgtgatcaggcaaaagtactagtc
gccacggacgctcctgcggctggtgcggtgagtgcagaagcctatgccgattatcttgcc
gcggcgattgagttgttggctgataaccgacaccaaacgattgtattgttcaattcactg
gcgaccattgccgcggtttaccaacgccttgctcatcgaccgattgccgatcataaagag
ttattggctcagggggtgactggttcggcggaaaagatcgccaagcgttttgcggttggt
gatcaaagtttattgctcggtgccgcaagcttctttgaggggattgattatccggatcgg
ttgctcgaaatggtgatcttgacccggttgccgttcgatgcgcccgaagccgccatcacc
aaagctcgatatgaacgacttcaggcagcaggccgcgatccatttactgaggatgctttg
ccacgcgcaaccttgcgattacgccagagttttgggcgcttgatccgaaccgaaaccgat
cgcggtatcttcgttgtcctcgacccccgattcatcaccacacgctacggtcgaaaaatg
cagaaatccttaccaaatattaagccaatgacgttgccactaactgacatgccggggtac
attaagatgtggctagacagagcgtga

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