Lacticaseibacillus casei 12A: LCA12A_1001
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Entry
LCA12A_1001 CDS
T03665
Name
(GenBank) substrate-binding component of an ABC superfamily L-carnitine/choline transporter
KO
K05845
osmoprotectant transport system substrate-binding protein
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCA12A_1001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcx02000
]
LCA12A_1001
Transporters [BR:
lcx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
LCA12A_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
EKQ02022
LinkDB
All DBs
Position
complement(62948..63877)
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AA seq
309 aa
AA seq
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MKTFRKMLLSLFLIPVLLLGGCGFPGLGGSGNDGTVRIASQTSTESQIMANIIAELINHE
LGYKTTLVNNLGSGTVVHQAMIRNDADISATRYTGTDITGTLGMNPVKDPAEATAIVKRE
FKKRYDQTWYPSYGFSDTYAFMVTQQEAKKDGLSTISDLKKVASRYNAGVDSSWMNRKGD
GYSDFTKMYGFDFKRVYPMQIGLVYDAVEANKMQTVLGYSTDGRIRSYNLKVLKDDKKFF
PPYQCSLVVNNSFLKKYPKLKPLLHRLDGKINLKTMQELNYQVDDQLLEPNVVAQKFLAK
HNYFKGSDD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattcagaaaaatgctcctatcgctgttcctcatccccgtcttgctattaggc
ggctgcggctttcccggactgggcggctctggtaatgacggtactgtgcggatcgcttcg
caaaccagtactgaatcgcagatcatggcaaatatcattgccgaactcattaatcatgaa
ctcggctacaaaacgactttggtcaacaacctgggttctggtaccgtggtgcatcaagcg
atgattcgtaacgatgctgacattagtgctacccgttacactgggaccgacattaccggt
accttaggcatgaatcccgtcaaggatcctgccgaagctacggcgattgttaagcgcgaa
ttcaaaaagcgttacgaccagacttggtacccgtcttatggtttttccgacacttatgct
ttcatggtgacccaacaggaagccaaaaaggacggtttgagcaccatttccgatttgaag
aaagtcgcttcgcgttacaacgcgggcgtagattccagttggatgaaccgcaaaggcgac
ggttatagcgacttcaccaaaatgtatgggttcgatttcaaacgagtctacccgatgcag
atcggactggtttacgacgcggtcgaagccaacaagatgcagacggtcttaggttactca
acagacggccgcattcgcagttacaacttgaaagtgctgaaggatgacaaaaagttcttc
ccaccttatcaatgttcgctcgtcgtcaacaacagctttttgaaaaaatacccgaaactc
aagccgctgttacatcggttagatggcaaaatcaacctgaagacgatgcaagagctgaat
tatcaagtcgatgatcaactgcttgaaccgaacgtggtcgcgcaaaagtttcttgccaaa
cacaactatttcaaaggaagtgacgactaa
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