Lacticaseibacillus casei 12A: LCA12A_1256
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Entry
LCA12A_1256 CDS
T03665
Name
(GenBank) DNA helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LCA12A_1256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_1256
Enzymes [BR:
lcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCA12A_1256
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LCA12A_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PIF1
AAA_19
SLFN-g3_helicase
Zn_ribbon_SprT
Zn_ribbon_6
Zn_ribbon_ISL3
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
EKP99581
LinkDB
All DBs
Position
complement(1635901..1638318)
Genome browser
AA seq
805 aa
AA seq
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MAIVAKVIVDVPTMQTDRPFDYLVPARLEGALQAGMRVWVQFGKGARKVSGMVVSVSDQS
DYDGQLKPLLDVLDPAPVLDHELLKLSKWLAQTTYSFWIACMQTMLPTMLKIDAVKVAEP
VKLSADEQQKYFGTADSLAIGSLNAEQQVAVMKLAQAGKVAISYLKKDRARVKKIFYLIP
QLSPEQAAAEREHVRKNAAKQLKLLTLIGEWAANNQHPALMTVEHQYGLTKPVINQAVEK
GWLKLEGHETYRDPYPELQHQPLTKPLPLTPEQQTIVTQINAAVAERDPKTFLLEGVTGS
GKTEVYLQVIARVLAAGQTALMLVPEIALTPQMVNRVKGRFGTHVAVMHSGLSDGEKYDE
WRRIARGEAQVVVGARSAAFAPLKNIGVFIMDEEHETSYKQDSAPRYYARDVLLKRAQIH
HAPVVLGSATPSLESRARAEKGVYTLLRLPHRINDQPLPPVHIVDMREAFAHGAQEDFSG
PLLDALRIRLQRQEQSVLLLNRRGYSSFVMCRDCGYVAKCPNCDISLTLHMDTHTLKCHY
CGHEEPIPHRCPNCGSDKIRYYGTGTQKVEAQLQQLLPDARILRMDVDTTRRKGGHARIL
DAFGDHQADILLGTQMIAKGLDFPDVTLVGVINADTALGLPDFRASEKTFQLLTQVSGRA
GRADKPGEVFVQTFNPDHYAIQYAKRQDYEGFFRQEMAIRHRGNYPPYFYSTKIAVSHVD
ETQAAKAIFSLAKELREHLSDQVIMLGPTPGPIARLKNRYIYQIVLKYKHEPALAATLQH
ILEETQQSSRHGFLVAIDPEPLAFV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
ttggcaattgttgccaaggtgatcgtggatgtgcccacgatgcaaacagatcgaccgttt
gattatcttgtacctgcgcgcttagaaggcgctttgcaggcgggaatgcgggtctgggtc
cagtttggcaaaggcgcgcgaaaagtgagcggcatggtcgtgtcagtctccgaccaaagc
gactatgacggtcaattgaaaccattgctagatgtccttgatccggcccccgttttggac
cacgaattattaaagctatcgaagtggttggcgcaaacaacgtattctttttggattgcg
tgcatgcagacgatgttgccaactatgttgaaaatcgatgcggtaaaagttgctgaaccg
gttaagctgtcggctgatgagcaacaaaaatactttgggacggctgacagtctggcgatc
ggtagcctgaacgctgaacagcaagttgcagtgatgaaattggcgcaagcaggtaaagtt
gctatttcatatttaaaaaaggatcgtgctcgggttaaaaaaatcttttacttgatcccg
caattatcaccggagcaagcggctgccgagcgtgaacacgtgcgtaaaaacgccgccaag
caacttaaactgttaactttaattggtgaatgggctgctaacaatcagcatcctgctttg
atgaccgttgaacatcaatatggcctgacaaagccggtgattaatcaggcagtcgaaaaa
ggctggctgaagcttgaaggccacgagacataccgcgatccttatccggaactgcagcat
caaccgttgacgaagccgttgccgctcacgccagaacaacagacgattgtgacgcaaatt
aacgctgccgttgccgaaagggatcctaaaacatttttgctagaaggggtcaccggctct
ggcaaaacagaagtctatttgcaggtgattgcacgggttttagccgcgggacagacagcc
ttgatgcttgtgccggaaattgcgttgacgccgcaaatggtcaatcgcgtaaaaggccgt
tttgggacgcatgttgccgtgatgcactctggcttgtctgatggcgaaaagtatgatgaa
tggcgccgaattgcgcgcggcgaggctcaggtcgttgtcggcgcacgatcggcagcattt
gcgccgttaaaaaacatcggcgttttcatcatggatgaagagcacgagaccagctacaaa
caagattcggcgccacgctattatgcccgtgacgttttgttaaaacgggcacagattcac
catgcaccggttgtgttgggctcagcaacaccttcattggagtcgcgcgctcgagcggaa
aagggcgtttatacactgctgcggctgccgcatcggattaacgatcaaccattaccgcca
gtgcatattgttgatatgcgggaagcctttgcgcacggcgcgcaagaggacttttcgggc
ccgctgcttgacgccttgagaattcgactacagcgacaggaacaaagtgttttgctcttg
aatcggcgcggttattcaagttttgtgatgtgtcgcgattgcggctatgtggcaaaatgt
ccgaactgtgacattagtctgacgctgcacatggacacacacaccttgaaatgtcattat
tgcggccatgaggaaccgattccacatcgttgcccaaactgcggctctgataaaattcgc
tattacggtactggcacccaaaaggtcgaggcgcagttgcagcagctgctgccagatgcc
cgaatcttgcgaatggatgttgataccactcggcgcaaaggtggccatgcgcggatctta
gatgcgtttggtgaccatcaggccgatatcttactgggtacgcaaatgatcgcaaaggga
ctggattttcccgatgtgactttagttggtgtcattaatgcggacacagcgctcggcttg
ccggattttcgggcgagtgagaagacctttcagttgctcacacaggtgagtggccgggct
ggtcgggcggacaaacccggtgaagtcttcgttcagaccttcaatccagatcattatgcc
attcaatacgccaaacggcaggactacgaaggctttttccggcaagagatggccattcgg
catcgcggcaattatccgccatatttttattcaacgaaaatcgctgtgagccatgttgat
gaaacacaggcggctaaggctatcttttctttggcaaaagaattacgtgagcatctatcc
gatcaggtcatcatgcttggcccgacaccaggaccgattgctcgtttgaaaaatcgctat
atttaccaaatcgttctaaaatataaacacgagccggcgttagcggcaaccctgcagcat
attctggaagagacccagcaaagcagtcgtcacggctttttagtcgcgattgatccagaa
ccgttggcatttgtttaa
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