Lacticaseibacillus casei 12A: LCA12A_1422
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Entry
LCA12A_1422 CDS
T03665
Name
(GenBank) periplasmic-binding component of an ABC superfamily oligopeptide transporter
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx01501
beta-Lactam resistance
lcx02010
ABC transporters
lcx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCA12A_1422
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCA12A_1422
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LCA12A_1422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcx02000
]
LCA12A_1422
Transporters [BR:
lcx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LCA12A_1422
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF4995
Motif
Other DBs
NCBI-ProteinID:
EKP99748
LinkDB
All DBs
Position
complement(1176675..1178315)
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AA seq
546 aa
AA seq
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MKTQQKWLVVAAAALTFVLTACGTQSSKDSSSSSKQQVWHRMEADVLQTLDPSKASEGVS
GQAIIDTMNGLYKYYGHDLQPAMATKIVKPTNNGLTYTFTLRNAKWSDGTPVTAQDFVFA
WQRTVDPATKSTQANMYSGIKNADDIRAGKKPATDLGIKAINDKTLEVTLEHPIPYFNSL
LNNVAFFPQPAKKVKAWGAKYGTKSQYTLSNGAFKSKGWTGTGDKWTEVKNTNYWNKKNV
HLTQIDVQVVKDTNTALDLYRTGKLDDANLTGQLAAQQKGKNGYVATKRARTYFLELNEN
KVPAFKNTKIRQAISMAINRDSFVKNVLADGSIVARGITPADLSQLPDNSTDYATAVAKN
TKAITTYNKKKAQTLWAEGLKEVGTKTVDVELLGDDVDAVKATQEYLQGALQENLPGLKI
SIASVPAKNRQQRAATHDFDMVLSTWGADYPDPNTYLDLFTSSSEYNHGQWQNADYDKLM
AKSNGADANNPTARFKDMTEAEQLLVNQAGAIPLYQLVAARMVNPKIHDLKTSPGNSFNF
VYAYLK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacacaacaaaaatggcttgtggttgctgctgcagcactcacttttgtactgact
gcatgcggtacccaatcgagcaaggacagttctagttccagcaagcaacaggtctggcac
cgaatggaagccgatgtgttgcaaacgcttgatccaagtaaagcatctgaaggtgtctct
ggacaggctatcattgataccatgaacgggttatataaatactacggtcacgacctgcaa
ccagccatggcgaccaaaatcgtgaagccgacaaataatggcctcacctacacctttacg
ttacgcaatgccaagtggagtgacggcaccccggtcacagcccaagatttcgtttttgct
tggcagcgaaccgttgatccagctaccaagtccactcaggccaacatgtactctggcatc
aagaatgcggacgacattcgtgcaggcaaaaagccggcaacagatctgggcatcaaggct
attaatgataaaactttagaagtcacgcttgaacacccgattccttacttcaatagcttg
ttaaataacgttgcgtttttcccgcaacctgctaagaaggttaaggcatggggcgccaag
tacggtaccaagtcgcaatatactttgtcgaacggtgcttttaaatccaaaggctggacc
ggcactggcgataaatggacagaagttaaaaataccaactattggaacaaaaagaatgtt
catttgacgcaaattgacgttcaggtagtcaaggataccaatacggcacttgacctatat
cgcactggtaaacttgacgatgccaatttaaccggccagctcgctgcccaacaaaagggc
aagaatggttatgttgccactaaacgggcccggacttacttccttgaattaaatgaaaac
aaggtcccggcattcaagaataccaagattcgccaggccatctccatggcgatcaatcgc
gactcttttgttaaaaatgtgttagccgacggttctattgtcgcccgtggcattaccccg
gctgatctcagccagttgccggacaacagcaccgattatgcgacagcggtcgccaagaac
acgaaggccatcacgacttacaataagaagaaggctcaaacattgtgggcagaaggcctg
aaagaagttggcaccaaaacagttgatgttgagctgctaggtgatgatgttgatgcagtc
aaggcaactcaagaatatcttcaaggtgctttgcaagagaatttgccaggcctcaaaatc
agtatcgccagtgtgccagctaagaaccgtcagcagcgcgctgccacccacgattttgac
atggtcctcagtacttggggggcggattatccagatcccaacacctatctcgatttgttc
acgagtagcagtgaatacaaccatggccagtggcaaaatgctgactatgataagctcatg
gctaagagtaacggtgcggatgctaacaacccgactgcccgcttcaaggacatgactgaa
gctgaacagttgctggtcaatcaagccggtgccatcccgctgtatcaactcgttgcagca
cgcatggttaatccgaagatccatgatctgaagacgagcccgggcaacagtttcaacttt
gtttacgcctatctgaaataa
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