Lacticaseibacillus casei 12A: LCA12A_1523
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Entry
LCA12A_1523 CDS
T03665
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03030
DNA replication
lcx03430
Mismatch repair
lcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCA12A_1523
03430 Mismatch repair
LCA12A_1523
03440 Homologous recombination
LCA12A_1523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcx03032
]
LCA12A_1523
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_1523
Enzymes [BR:
lcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCA12A_1523
DNA replication proteins [BR:
lcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCA12A_1523
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCA12A_1523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DUF4192
Spb1_C
TMEM214
Motif
Other DBs
NCBI-ProteinID:
EKP99848
LinkDB
All DBs
Position
1283667..1284710
Genome browser
AA seq
347 aa
AA seq
DB search
MQVRDFIKHLKNGERPPLTLILGEESALRQQAQHAIASMIPEDQQAMNFGRYDMQQTPVG
AALNDATSMPFFGDYREVVIDDPYFLTGEKNADKVDHDLVGLQAYFENPVPSTMMVIIAP
YKKLDERKRLTKALKKAALIVNAAPLDEREARAALAQTFKKHQVTIDAPALDTLVQRTNG
QYSIMMGEVRKLLTYASDGSPLTVAAVEALVPKQLNDRVFDLVTDVLRKNAAAALALYRD
LLAQREEPIRLNALMLGQFRLLLQVKLLAKKGYSQGDIAGTLKAHPYRVKLAMRQVDRLP
YQQLATAYSGLVDTETAMKTGTIDKALAFELFMLKYTGQQSGKHVRG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccgtgattttatcaaacatcttaagaatggcgaacgaccgccgctgacattg
attctcggtgaagaatccgcattgcgtcagcaggcacaacacgcgatagccagcatgatt
ccggaagatcaacaggccatgaactttggccgctatgatatgcagcaaacgcctgttggt
gcagccttgaatgatgcgacctcgatgcccttttttggggattatcgggaagtcgttatt
gacgatccgtattttttgacaggcgaaaaaaatgccgacaaagtcgatcatgatcttgtt
ggtttgcaggcttattttgagaacccagtaccgtcaacgatgatggtcatcatcgcgcct
tataagaaacttgatgaacggaaaaggttgaccaaggcattgaaaaaggcggcgctcatt
gtgaatgcagcaccgcttgatgaacgggaggcgcgtgctgctttagcccaaacatttaaa
aagcaccaagtgaccattgatgcaccggcattggatacccttgtgcagcgcactaacggc
cagtattcgatcatgatgggtgaggttcgcaaactactgacctatgccagtgatggcagc
ccgctgaccgttgcagcagtcgaagccctagtacctaagcagctcaatgatcgggtgttt
gacttggtgactgatgttttgcgcaaaaatgctgcggccgctttggcgctgtatcgtgat
ttattggctcagcgtgaagaacccattcgtttgaacgcattgatgctaggccagtttcga
ctattgctgcaggtgaaattattagcaaaaaaagggtatagtcaaggcgatattgctggc
accctcaaggcccatccatatcgggttaaattagccatgcggcaagtggatcgcttacct
tatcagcagctcgcgactgcctacagtggcttggttgatactgaaacagcaatgaaaacg
ggaactatcgataaggcgttggcttttgaactatttatgctaaagtacacaggacagcag
tctggcaagcatgtgcgtggttaa
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