Lacticaseibacillus casei 12A: LCA12A_1562
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Entry
LCA12A_1562 CDS
T03665
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcx03009
]
LCA12A_1562
Enzymes [BR:
lcx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LCA12A_1562
Ribosome biogenesis [BR:
lcx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LCA12A_1562
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
EKP99887
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All DBs
Position
1329208..1329951
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AA seq
247 aa
AA seq
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MTTKTERLQKIIANAGIASRRHAETLIATGHVKVNGQIETEMGIKIGPHDEVEVDGVPIG
KEAKRYFLFYKPRGVISAVQDNKGRDVVTDYFKDIAERLYPVGRLDYDTSGLLVMTNDGD
LANHLMHPRYALEKKYVAKVQGVPNRPALAPLKTGVEVDGKMTAPAKVDIISTDKAKKTA
IVSLTIHQGMNHQVKKMFKAVGFPVLKLSREAYGNLTLVGLQPGEHRPIKPQELQALRKL
AGESESK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaaaactgaacggcttcaaaaaattatcgcaaatgccggtattgcttcgcgt
cgacatgcggaaacgttgattgcaactggccatgtcaaagttaatggccaaattgaaacg
gaaatgggcatcaagattggtccgcatgatgaagtcgaagtggatggcgtgccgattggc
aaagaggctaagcgctactttctcttttataaaccgcgcggcgtgattagtgctgttcaa
gataataagggacgtgatgtcgtcaccgattactttaaggatattgctgagcgtctttat
ccagttggccgattagattacgatacaagcggcttacttgtgatgacaaacgatggcgat
ttagccaaccatttgatgcatccacgttacgcgcttgagaaaaaatatgtagccaaggtt
caaggtgtaccgaatcgacctgccttggctccgctcaaaacaggtgtcgaggttgatggc
aagatgactgcgcctgctaaagtagacattatctcgactgataaggctaaaaaaacggcg
atcgtatctttgaccattcatcaaggcatgaatcatcaggttaaaaagatgtttaaagca
gtcggcttcccagttctaaaactatctcgggaagcgtatggcaacttaactttggtgggg
ttacagccaggtgaacatcggccaatcaagccgcaagaactgcaagccttgcgaaaacta
gcgggtgaatcggaaagtaagtag
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