Lacticaseibacillus casei 12A: LCA12A_1597
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Entry
LCA12A_1597 CDS
T03665
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcx03032
]
LCA12A_1597
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_1597
Enzymes [BR:
lcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LCA12A_1597
DNA replication proteins [BR:
lcx03032
]
Prokaryotic type
DNA Topoisomerases
LCA12A_1597
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LCA12A_1597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
C1_2
Motif
Other DBs
NCBI-ProteinID:
EKP99922
LinkDB
All DBs
Position
1359699..1361783
Genome browser
AA seq
694 aa
AA seq
DB search
MADKKLVIVESPAKAKTIEKYLGRTYKVVASLGHIRDLPKSQMGVDVDNDYEPKYISIRG
KGDVIKSLKKDAKKASKIYLAADPDREGEAIAWHVSHILGLDPKAKNRVVFNEITKDAVK
NAFKTPRGIDMDLVDAQQARRILDRLVGYSISPLLWKKVKKGLSAGRVQSVALKLIIDRE
NEIKNFTPEEYWSLDAEFQKGRSKKFSASFYGLKNKKQALKNNEAVQKILGQVDKTKPFA
VTNVVKKERKRFPSPPFTTSTLQQEANRKLGFRTRKTMMLAQQLYEGINLGGKLGTVGLI
TYMRTDSTRVSNVAKTETSHYLHEKYGEAYAAVKIRQGKLQEGAQDAHEAIRPTSTLRTP
DSLTAVLDKDQMKLYRLIWSRFVASEMTPAIIDTVAVTLDQNGVTFRANGSQTKFEGFTK
LYVSSRDSDQKDNILPPLAVGDDVKMLKTDPAQHFTQPPARYSEANLVKALEENGVGRPS
TYAPTIETIQKRYYVKLNARRFEPTELGEIVNSLIVEFFPDIVNIKFTANVESELDGIET
GEADWVKVIDQFYKPFEKEVAHAETGIAKIQIKDEPAGFNCDICGAPMVIKMGRYGKFYA
CSRFPDCRNTKAIVKEIGVVCPKCHIGQVVERKSKRNRVFYGCSRYPDCDFVSWDKPVGR
DCPVCGHFLVEKKSKAGTQVVCPNNDYKEALQKA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaagttagtcattgttgaatcgccagccaaagccaagactattgaaaag
tatcttggtcgaacctataaagttgttgcaagtttggggcacattcgcgatctacctaag
agtcagatgggggtcgatgtcgataacgactacgagccaaagtacatttcgattcgcggc
aaaggcgatgtgattaaatcccttaaaaaagatgctaaaaaagctagcaagatttatctc
gcagccgatccggatcgtgaaggagaagccattgcatggcatgtcagtcacattttaggt
ttggatccaaaagccaaaaatcgcgtcgtttttaacgaaattacgaaagatgccgttaaa
aatgcgttcaaaacccctcgtggcattgatatggatcttgtagatgcccagcaggcacgg
cggattttggatcgactggtaggctattccatcagtcctttattatggaagaaagttaaa
aaaggcctgagtgctggccgcgttcaaagtgttgcgctaaagctgattattgatcgcgaa
aatgaaatcaaaaacttcacgccagaagaatactggtcattagatgctgagttccaaaag
ggccgtagtaaaaagttcagtgctagtttctatggcctgaagaataaaaagcaggcttta
aagaacaacgaagccgttcaaaagattttgggccaagtggacaaaactaagccgtttgct
gtgacgaatgttgttaaaaaggaacgcaaacgcttcccatccccgccgttcacaaccagt
accttgcagcaggaagctaaccgtaagttgggattccgcacccgaaagaccatgatgttg
gcccagcaactgtatgaaggaattaacttaggtggtaagttaggcaccgttgggctgatc
acgtacatgcggaccgactcgactcgcgtgtcaaatgttgccaaaactgaaaccagccat
tacctgcatgagaaatacggcgaagcttatgctgctgtcaaaattcgccaaggtaaactg
caggaaggggcacaagatgcccacgaagccattcggccaaccagcacattacggacaccg
gatagtttgacggcagttttggacaaggatcagatgaaactttatcggctgatctggagt
cggtttgttgccagtgaaatgaccccggcgattattgacactgtggccgtgacgttagac
caaaacggtgtgactttccgcgccaacggtagtcagactaagtttgaagggtttaccaag
ttgtatgtctcatcacgtgacagcgatcaaaaggacaatattttgccaccgcttgcagtt
ggtgatgatgtcaaaatgttgaagaccgatccggctcaacactttacacagccaccagcc
cgttactcggaagcaaaccttgtcaaagcgcttgaagaaaatggcgttggtcgtccgtca
acttatgcgccaactatcgaaaccattcagaaacgttactacgtgaaactgaatgctcgt
cggtttgaaccgactgaattaggtgagatcgtcaacagcttgatcgttgaattcttcccg
gacatcgtgaatatcaagtttacggcgaacgtcgaatctgaacttgatgggattgaaacc
ggcgaggctgattgggttaaggtgattgatcagttctataagccatttgaaaaagaagtg
gctcacgccgaaactgggatcgcgaagattcaaatcaaagacgaaccagccggcttcaac
tgtgacatctgcggtgcgccaatggttatcaaaatgggtcgctatggtaagttttacgcc
tgttcccgattcccggattgccgcaacaccaaggccattgtcaaagagatcggggttgtc
tgcccgaaatgtcatatcggtcaagttgttgaacgtaagagcaagcgtaaccgcgtcttt
tatggttgctcgcgttatccagactgtgactttgtctcatgggacaaaccagtcggccgc
gattgcccggtctgcggacatttcttagttgagaaaaagagcaaagctggcacccaagtc
gtctgcccaaataacgattataaagaagccttacaaaaagcataa
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