Lacticaseibacillus casei 12A: LCA12A_1656
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Entry
LCA12A_1656 CDS
T03665
Name
(GenBank) cell wall enzyme
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCA12A_1656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcx03032
]
LCA12A_1656
Enzymes [BR:
lcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
LCA12A_1656
DNA replication proteins [BR:
lcx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
LCA12A_1656
Prokaryotic type
Elongation factors (bacterial)
RNase H
LCA12A_1656
Elongation factors (archaeal)
LCA12A_1656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RVT_3
Motif
Other DBs
NCBI-ProteinID:
EKP99981
LinkDB
All DBs
Position
1427811..1428209
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AA seq
132 aa
AA seq
DB search
MLKLYTDGATKGNPGPAALGILVSGLPHQIQKHAALPAMSNHEAEFAAAIAGFELLIQAG
LNTTPVAFYSDSKLVIQAIEKQYAKHYPDLAGRLLTLIGQFPLVLPNWLPDRANRGAHML
AQQGLRQSETKI
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaactatacacagatggcgcgacaaaaggcaacccaggacccgctgcgctcggc
atcttggtcagtggcttgccccatcaaattcaaaaacatgctgcactgccagcaatgagt
aatcatgaagccgagtttgcagccgcaatcgctggttttgaactgctgatccaagccggc
ttaaatacaacaccggtcgccttctacagtgattccaagcttgtgattcaggcgattgaa
aagcaatacgctaagcactatcccgacctagcaggccgtttgctgaccttaatcggtcaa
tttcctttagtattgccaaactggctgcctgaccgggccaatcgcggcgcccatatgtta
gctcagcaagggttgcgccaatctgaaactaaaatataa
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