Lacticaseibacillus casei 12A: LCA12A_1893
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Entry
LCA12A_1893 CDS
T03665
Name
(GenBank) ATP-binding component of an ABC superfamily peptide transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx02010
ABC transporters
lcx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LCA12A_1893
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCA12A_1893
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcx01002
]
LCA12A_1893
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcx02000
]
LCA12A_1893
Peptidases and inhibitors [BR:
lcx01002
]
Cysteine peptidases
Family C39
LCA12A_1893
Transporters [BR:
lcx02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LCA12A_1893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_24
SMC_N
ABC_ATPase
AAA_29
AAA_22
DUF87
AAA_18
AAA_33
Peptidase_C39_2
Motif
Other DBs
NCBI-ProteinID:
EKP96685
LinkDB
All DBs
Position
complement(2348890..2351082)
Genome browser
AA seq
730 aa
AA seq
DB search
MIKYNLKLGQAQYYKRYYTPQVDERDCGVAALNMLLQFNGSDYSLAHLRQLAKTDQEGTT
ALGIVRAAQALHFETKAVKADMTLFDLDDVPYPFLVHVLKRGELLHYYVVFKATKDHILI
GDPDSSVAMTWLPKERFAKEWSGVAIFIAPEPQYQPRKEDKGSLFAFVPMLARQKGIIAN
IIVAAVLITLISIVGSYFLQSIIDTYIPNGMRTTLGMIASGLILAYVLQSVLTYGQNFLM
AVLGQRLSIDVILGYVRHLYELPMSFFSTRRTGEIVSRFSDANKIIDALANTIMTLFLDI
WIVLILGIVLGIQNTTLFLVSLIAVPCYLVIVFAFQRPFNRLNQETMESNAILSSSIIED
LNGIETIKSLTGEKVSYERVDREFVTYLKKSFNYTKADQLQQAIKGLLKLVLNVVVLWIG
ASLVMANKMSLGQMLTFNALLAYFTNPLESIINLQPKLQMAKVANNRLNEVYLVESEFKE
QRSLNDRHLIDGAINVTDVSFKYGFGQDVLKQINLEIPANAKYTIVGMSGSGKSTLAKLL
VGFYPVDTGKGKITFNGVPISDVDLTTLRQYIEYVPQDPFIFSGSVIENLTLGSRSNITE
ADIEAACSVAEIAGDISNLPQIWQTKLSESGSILSGGQKQRLAIARALLSPAKVLIFDES
TSSLDTITERKIVDRLLAMTDRTIIFVAHRLTIAAKTEQIVVMDHGAIVEQGNHTELLAK
QGYYARLVSE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaatacaacctaaagctcggccaagcacagtattacaagcgttactacacgcct
caggtggatgagcgcgattgcggggttgcggcgcttaatatgctgctgcaatttaatggc
tcggattattcgctagcgcatctgcgacagttggcgaagacggatcaggaaggaacaaca
gcgttagggattgtccgagctgctcaggcgcttcattttgaaaccaaggctgtcaaggcg
gatatgacgctgtttgatcttgatgatgttccttatccgtttcttgtccatgttttgaag
cgtggcgagttgcttcattattatgtggtgtttaaggcgacaaaggatcatatcttgatt
ggcgatcctgattcatcagtagcgatgacctggcttcccaaagagcgctttgcgaaggag
tggtcgggggtcgctatttttattgcgccagaaccgcaatatcaaccacgcaaagaggac
aaaggcagtctctttgcgtttgtgccgatgctagcgcgacaaaaaggaatcattgccaat
attattgtcgccgctgtgttgatcacgttgattagtattgtcgggtcttattttcttcag
tcgattattgatacttatattccaaacgggatgcgcacaactttgggaatgattgccagt
ggtctcatcctcgcttatgtgctgcagtcggttttaacctatgggcaaaattttttgatg
gctgttttaggacaacgtttgtcgattgatgtcattttgggttacgtcagacacctttat
gaattaccgatgtccttcttttccacgcgtcggactggggaaattgtgtcgcggttttcc
gatgctaataagattattgatgcgctggcaaacacgattatgaccttgtttcttgatatt
tggattgtcttaattttagggatcgtgttaggcattcaaaacaccaccttattcttggtg
tctttaattgctgtgccttgttatttggtgattgtgttcgcttttcagcggccatttaat
cgactgaatcaagagacgatggaaagcaatgccattttgagttcatctattatcgaggac
ttgaacgggattgagacgattaaatcactgaccggtgagaaagtcagttatgaacgggtt
gaccgtgaattcgtcacgtatttgaaaaagtcgttcaattatacaaaagctgatcaactg
cagcaggcgatcaagggactgctgaagttggttttgaatgtggtcgtgctgtggattggt
gcgagtttggtgatggctaacaagatgagtctaggacagatgctgacgttcaatgcgttg
ttggcatatttcactaatccgttagaaagcatcattaatttgcaaccaaaattgcaaatg
gccaaagtcgcgaataaccggctgaatgaagtgtatttggttgaatcggagtttaaagaa
cagcgaagtttgaatgatcggcatttaattgatggcgccatcaatgttaccgatgtgtcc
tttaagtatggttttgggcaagatgttttgaaacaaatcaaccttgaaatcccggcgaat
gccaaatacaccattgtcggcatgagtggatcagggaaatcgaccttagccaagttgcta
gtaggtttctatccagtggacactggcaaagggaaaatcacatttaatggtgttcccatc
agtgatgttgatctaacaacgttacgccaatacatcgagtatgtaccgcaagatccgttt
attttttctggctcagtcattgaaaacttaacgttgggtagccgttcgaatatcactgaa
gccgatattgaagctgcctgttcagtggcggaaattgccggagatatttcgaatttgccg
cagatatggcagaccaaactttctgaaagcggcagtattttatcgggtggacaaaagcag
cgcctagcaattgcccgcgcgttattatcaccggcaaaagtgttgatttttgatgaatcg
accagcagtttagatacgatcaccgagcgaaaaattgttgatcggttgttagcgatgact
gatcgaaccattatttttgtggctcatcggctcactattgctgctaaaacggaacagatt
gtggtcatggaccatggtgcgattgttgaacaaggaaatcatactgagttattggccaaa
caaggctattatgctcggttggtaagtgagtga
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