KEGG   Lacticaseibacillus casei 12A: LCA12A_2214
Entry
LCA12A_2214       CDS       T03665                                 
Name
(GenBank) DNA/RNA helicase
  KO
K02240  competence protein ComFA
Organism
lcx  Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:lcx00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lcx02044]
    LCA12A_2214
Secretion system [BR:lcx02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   LCA12A_2214
SSDB
Motif
Pfam: Helicase_C DEAD ResIII AAA_30 Helicase_RecD AAA_22 AAA_19 Flavi_DEAD SWI2_SNF2
Other DBs
NCBI-ProteinID: EKQ00257
LinkDB
Position
854656..855918
AA seq 420 aa
MNLAGAQLTENELMRLTVSNIAQATSLPALIQEHGRWCCQRCGDRKPVQLPDGRFYCSAC
VSIGRLTNRDLLYRFEQPHRPVGDGLLTWHGTLTPAQQKASTALQTSVTAGADHLIWAVT
GAGKTEMLFPTISQMVQQGKRVAIVSPRIDVIRELAPRLRTAFATTPIAVRYGGHFDQTD
SDLMLATVHQLLRFHRAFDLIVVDEVDAFPMAGTPMLHRAVQGARRGPVVYLTATPDRPL
KAAMRKGLMVSRLFRRFHGHPLPVPAIRLMNFKKLPSQLPPAIVKWVRDVVATGRSCLLF
VPKISWAPQIAALVQRNGLRVAGVASTDRLRAEKITAFRQRKIQVLVTTTILERGVTVPR
CVVGVVAAADRAFTASALVQIAGRAGRAADSADDPVVFFTDRYTLALLAAKRQIVMMNGR
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaatcttgctggggcacaattgacagaaaatgaactgatgcgcttaaccgtttctaat
atagcacaggccacatcactgccagcgttgattcaagaacacgggcgctggtgttgccaa
cgttgcggtgatcgaaagccagttcaattgcctgatgggcggttttattgttcagcttgc
gtgagtataggccgcttaacaaatcgtgatttgctttaccgctttgaacagccgcaccgg
cctgttggcgacggcttattaacgtggcacgggacattgacgcctgcccagcaaaaagcg
tcaacggctttacaaacgagtgttacagcaggggctgatcatttgatttgggcagtgaca
ggtgctggcaaaaccgagatgctttttccgaccatttcacagatggtacaacaaggcaag
cgcgtggctattgtttcgccgagaattgatgttattcgggagcttgcgccgcgactgcga
actgcctttgcaaccacgcccatcgccgttcgatatggcggtcattttgatcaaactgac
agtgatttgatgctggccaccgtgcatcaattattacgatttcatcgggcttttgatctg
attgtcgttgatgaggtcgatgcgtttccgatggcgggaacacccatgctccatcgggct
gttcaaggtgcccggcgtggaccggttgtttatttaacggcaacgccggatcggccattg
aaggcggcgatgcgtaaagggttgatggtcagtcgattgtttcgtcgatttcacgggcac
cctttgccagttccagcgattcggttgatgaattttaaaaaattaccgtcccagttgcca
cctgccatcgtgaagtgggtgcgtgatgtcgtggcgacagggcggtcatgtttgctgttt
gttcctaagatcagctgggcgcctcaaattgctgcgcttgttcaacgtaacgggctaagg
gtagctggcgttgctagcacggaccgtctacgggcagagaaaataacggcttttcgtcag
cggaaaattcaggttttagtcacgacgacaattttggaacgtggcgtaacggtgcccagg
tgtgtggttggggtcgtggctgcagccgatcgggcattcacggcctcggcgctagtacag
attgctggtcgagccgggcgggcagccgatagtgccgacgatccggttgtctttttcacg
gatcgctatacgttagcattgttagcggccaaacgtcagattgtcatgatgaatggacgg
tga

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