Lacticaseibacillus casei 12A: LCA12A_2244 Help Entry LCA12A_2244       CDS       T03665                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism lcx  Lacticaseibacillus casei 12A Pathway lcx03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:lcx00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     LCA12A_2244  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lcx03400]     LCA12A_2244 DNA repair and recombination proteins [BR:lcx03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      LCA12A_2244   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       LCA12A_2244 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 RsgA_GTPase AAA_29 AAA_33 nSTAND1 AAA_23 nSTAND3 AAA_22 DnaJ_CXXCXGXG AAA_21 NACHT Viral_helicase1 AAA_14 cobW SLFN-g3_helicase BCA_ABC_TP_C NB-ARC RNA_helicase Septin MMR_HSR1 DUF87 T2SSE FtsK_SpoIIIE Motif Other DBs NCBI-ProteinID:  EKQ00287 LinkDB All DBs Position 889200..892091 Genome browser AA seq 963 aa AA seqDB search MANDKIVIHGARAHNLKNIDVTIPRNKLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLS AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGHP ICPNDGTPITSQSVEQMVDRVLALPDKTRIQILSPVVRRKKGSHKKVFAKIMREGYVRMR VDGEVVDATADYELDKNKSHDIDIVIDRIVVKPEARSRLFDSFEAALRLSEGYANVDVIG GEPLRFSEHFACPICGFTIGEMEPRLFSFNAPFGACPECDGLGVKLTVDMDLVLPEPSMT LAEGAIAPWNPISSQYYPELLAQAAKTFKVRMDVPFNKLTHRERNVVLNGSDGKLFHFHY ENDFGGVRDVDVPFEGVLNNISRRYAETNSDFTRQQMRSYMTALPCPVCHGKRLNRQALA VKIEGRDIAEVSDLAIKDALPFFKTVHLSEAESVIAQPIVKEVVDRLTFLVNVGLGYLTL SRSAGTLSGGEAQRIRLATQIGSNLSGVMYVLDEPSIGLHQRDNDRLIASLKKMRDLGNT LIVVEHDEDTMRAADYLIDVGPGAGEHGGRIMASGTPKQVARVRKSITGQYLSGRKFIPV PLKRRQGSGKVIRLEGATDHNLKNIDVDFPLGKFIVVSGVSGSGKSTLVNSILRRALAQK LNHNSEKPGPYKKILGYKNIEKLINIDQSPIGRTPRSNPATYTSVFDDIRGLFAETNEAK LRGYKKGRFSFNIKGGRCENCKGDGIIKIEMNFLPDVYVPCEVCHGKRYNSETLEVTYKG KNIAEVLDMTVEEATDFFKNIPKIRRKLQTIVDVGLGYVKLGQSATTLSGGEAQRMKLAS ELQKLSTGKNFYILDEPTTGLHTDDIKRLLEVLERLVDEGNTVLVIEHNLDVVKTADWVI DLGPEGGDGGGQIIATGTPEQVANVADSYTGQYLKPILVRDTQRTKEAAQTSTKNEAQAV SKK NT seq 2892 nt NT seq  +upstreamnt  +downstreamnt atggcaaacgataaaattgtgatccatggggctcgtgcccacaacttaaagaatattgat gtgacgattccccgcaataagctggtggtcatgaccggtttatccggctcaggcaagtcc agcttagccttcgacacgttatatgctgaaggccaacgtcgttacgtggaaagtctttcg gcctatgctcgccagtttttggggcagatggaaaaaccagatgtcgattcgattgatggt ttgagtccggccatttcgattgatcagaaaaccacttccaaaaatccccgatcaactgtc ggaacggttactgaaatcaacgattatttgcgcttgctttgggcgcgagtgggtcatcca atctgtccaaatgatggcaccccgattaccagtcaaagcgtagaacagatggtcgatcgc gttttagcgctgcctgacaagacacggattcagatcttgtcgccagtggttcgccgcaag aaaggcagtcacaaaaaggttttcgccaagattatgcgcgaaggttatgtccggatgcgt gttgatggtgaagttgttgatgcaacggctgattatgaactggataaaaataagtcgcat gacatcgatattgtgattgaccgaattgtggttaaacctgaggcgcgcagtcggcttttc gattcatttgaagcagctctgcggttgtcagaaggttatgccaacgtggacgtgattggc ggtgaaccactgcgcttttccgaacattttgcctgcccgatttgtggctttacgattggc gaaatggaaccacgactattttcattcaacgctccttttggcgcttgcccagaatgtgac gggttgggtgttaagctgacagttgacatggatttggtgctgccagaaccgagtatgact ttggcagaaggggcaatcgcgccatggaatccaatcagttcccagtactatccggaactg ctggctcaggcggcgaaaaccttcaaagtacgaatggacgtaccctttaacaagctgacc caccgcgagcgcaatgtggtgcttaatgggagcgacggcaagttattccattttcattat gaaaatgactttggcggtgtacgcgatgttgatgtgccttttgaaggggtgctgaataac atttcccgccgatatgcagaaacgaatagtgattttactcgccagcagatgcgcagttat atgacagcattgccatgcccggtttgtcacggcaagcggctgaatcggcaggctttggct gttaaaattgaaggtcgcgatattgcagaagtttctgatcttgccatcaaggatgcccta ccatttttcaaaaccgtgcatcttagtgaagccgaaagcgtcattgcccaaccaatcgtg aaagaagtcgttgaccgcttgacattcttggtcaacgttggtcttggttatctcacattg agtcgtagtgctggtacactatccggcggcgaggctcagcgaattcgcctagctacccaa atcggttcgaatctgagcggcgtcatgtatgtgcttgatgaaccatctatcggcttgcat cagcgcgacaacgatcgcctgattgcctccttgaaaaaaatgcgcgatcttggcaacacg ttgatcgtggtcgaacatgatgaagatacgatgcgcgccgccgattatctgattgatgtc ggaccgggggctggcgaacacggtggccgcatcatggcatccggtacccctaaacaagtt gcacgtgtgcgcaaatcaatcactggccaatatttatcagggcgcaagtttattccggta ccactaaaacggcgacaaggtagtggcaaagtgattcgtttggaaggcgccactgaccac aacttaaaaaacatcgacgttgattttccattaggtaaattcatcgtggtttctggtgtt tctgggtcaggtaaatctactttggttaactcgattcttcggcgtgcattggctcaaaag ttaaatcataattctgagaaaccgggtccatacaaaaagattcttggctataaaaatatt gaaaagctgatcaatattgaccaaagtccaattggccgcacaccgcggagcaatccggct acctatacgagtgttttcgatgacattcgcgggctatttgccgaaaccaacgaagctaaa ttacgtggttacaaaaaaggccgctttagtttcaacattaagggtggtcgctgtgagaac tgtaaaggcgacgggatcatcaagattgaaatgaactttttacctgatgtttacgtgcct tgcgaagtttgccatggcaaacggtataactctgaaaccctcgaagtaacgtataagggc aagaatattgctgaagtgcttgatatgactgtcgaagaagccactgacttcttcaagaat attccaaagattcggcgcaagttgcaaaccatcgtggatgttggccttggttacgttaag ctgggacaaagcgctaccaccttgtctggtggcgaggctcaacggatgaagcttgcaagc gaattgcagaagctttcaaccggcaagaatttttatattcttgacgaacccaccactggt ctgcatacggatgatatcaagcggctgctggaagtgttggaacggctagtcgatgaaggc aataccgtactggttatcgagcataatctagatgtcgtcaaaacagctgactgggtcatt gatcttggccctgaaggcggagacggcggcggtcagatcatcgccaccggcacacctgaa caggtggctaatgtggccgatagttatactggccaatacttgaaaccaatcctcgttcgc gacactcaacggactaaggaagctgcgcaaacatcaactaagaatgaagcgcaggcggta agcaagaagtag

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