Lacticaseibacillus casei 12A: LCA12A_2246
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Entry
LCA12A_2246 CDS
T03665
Name
(GenBank) putative ATP-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcx03019
]
LCA12A_2246
Messenger RNA biogenesis [BR:
lcx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LCA12A_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
Cas_APE2256
AAA_28
CoaE
AAA_16
AAA_30
DUF5447
Motif
Other DBs
NCBI-ProteinID:
EKQ00289
LinkDB
All DBs
Position
893144..894031
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AA seq
295 aa
AA seq
DB search
MTESLDLVIITGMSGAGKTVAMQAFEDLGYFCVDNMPPALLPKFWELVKESGKITKVALV
VDLRSRAFYDQIIDMLANLDNNAYVHSRILFLDATDEELVSRYKETRRSHPLAMEGRLMD
GIKKERALLTELRNRAQVVIDTTTLSPRQLREKIFLNFKESGSQPAFHIEVMSFGFKYGL
PIDADIVMDVRFLPNPFYIKDYRPKTGLDPEVYNYVMDNEDAESFYNKFYDLLSEIMPKY
KAEGKTSVTIAIGCTGGQHRSVAFAERIGKAFSDAYAVDITHRDIKKHKETVNRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaagtttggatcttgtcattatcaccggtatgtccggtgccggtaaaaccgtt
gccatgcaggcattcgaagacctgggatatttttgcgtcgataatatgcctccagctttg
ttgccgaagttttgggaattggtaaaagaatccggaaagatcacgaaggtcgcgcttgtt
gtcgatctgcgcagtcgtgctttttacgatcagattatcgatatgctggctaatttggac
aacaatgcctatgttcattctcgcatcttattcttggatgcaactgatgaagagctggtt
tctcggtacaaggaaacccgtcgctctcatccgttggccatggaaggccgattgatggac
ggcattaaaaaagaacgtgcattactcacagaattacgcaatcgcgcgcaggttgtgatt
gataccacgaccttaagtccacgtcagttacgggaaaagattttccttaactttaaggaa
agcggtagtcaaccagcatttcatattgaagtcatgtcattcgggtttaaatacggatta
ccaatagacgctgatattgtcatggatgtccgtttcctgcctaatcctttttacattaag
gattatcggcccaagactgggcttgatccggaagtttacaattacgtgatggataatgaa
gatgccgaaagtttctataacaagttttatgatctattgtctgaaatcatgccaaagtac
aaggcagaaggcaaaaccagcgtaacgattgcgattggctgcacaggcggccagcatcgg
agtgtggcttttgccgagcggattggtaaggcgttttcagatgcatatgccgttgatatc
acgcatcgagacattaagaagcataaggagacggtgaatcgctcatga
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