Lacticaseibacillus casei 12A: LCA12A_2286
Help
Entry
LCA12A_2286 CDS
T03665
Name
(GenBank) family 1 uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LCA12A_2286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_2286
Enzymes [BR:
lcx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LCA12A_2286
DNA repair and recombination proteins [BR:
lcx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LCA12A_2286
Prokaryotic type
LCA12A_2286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
EKQ00329
LinkDB
All DBs
Position
937972..938658
Genome browser
AA seq
228 aa
AA seq
DB search
MKTLIHNDWQTVLEPVFESPEYAQLHAFLKEEYATKTIYPEMHHIFQAFEWTPFHDVKVV
ILGQDPYHNPRQAVGASFAVAPGVALPPSLQNIYKELQSDLGYPPVHHGYLKAWADQGVL
LLNAVLTVQAGEAYSHQNHGWEELTDAAIAALSARGGVVFILWGNAAKKKAAVIDTSKNA
IIASAHPSPLSASRGFFGSRPFSRTNAALEKMGEAPINWQLPETVKAD
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattaatacataatgactggcagacggtgctggaaccggtatttgaaagtcct
gagtatgctcaactgcatgcgttcttaaaagaagaatacgcgacaaaaacgatttaccct
gaaatgcaccatatttttcaggcattcgaatggacacctttccatgatgtgaaggtggtc
attctaggccaggacccttaccacaatccgcggcaggcggttggtgcgagctttgcggtg
gcacccggtgtcgctttgccgccgtctttgcaaaacatttataaagagttgcaaagcgat
ttaggctatccaccggtccatcatggttatttgaaggcgtgggcggaccaaggcgttcta
ttgttgaatgccgttttgacggtacaagccggcgaagcctattcccatcagaatcatggc
tgggaagagttgacagatgctgccattgctgccttgtctgcacgcggcggcgttgtgttc
atcctgtgggggaacgcggccaaaaaaaaggcggccgtgattgatacgagcaagaacgcg
attattgcatcagcgcacccaagcccgttatctgcatctcgtggcttctttggcagtcgc
ccgttttcgcgcaccaatgcggcactagaaaaaatgggcgaggccccgattaattggcag
ttaccagaaacggtgaaggcggattaa
DBGET
integrated database retrieval system
