Lacticaseibacillus casei 12A: LCA12A_2292
Help
Entry
LCA12A_2292 CDS
T03665
Name
(GenBank) DNA polymerase III, epsilon subunit related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lcx
Lacticaseibacillus casei 12A
Pathway
lcx03030
DNA replication
lcx03430
Mismatch repair
lcx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCA12A_2292
03430 Mismatch repair
LCA12A_2292
03440 Homologous recombination
LCA12A_2292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcx03032
]
LCA12A_2292
03400 DNA repair and recombination proteins [BR:
lcx03400
]
LCA12A_2292
Enzymes [BR:
lcx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCA12A_2292
DNA replication proteins [BR:
lcx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCA12A_2292
DNA repair and recombination proteins [BR:
lcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCA12A_2292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
EKQ00335
LinkDB
All DBs
Position
complement(943447..943989)
Genome browser
AA seq
180 aa
AA seq
DB search
MDFIAMDFETANRKRASACSLALVVVQQNKVVDSFYTLINPQMQFDAQNIHIHGITPEMV
QDQPTFDQVWPHIQMFYTPGRIVTAHNAPFDVSVMRLTLDRYGIAAPRYQVIDTVKTSRQ
FLPKLPNHRLDTVSAALHIPLEHHHNALADSYACARILIAENEHFGEARIKSMMKLSKAG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcgccatggatttcgaaactgccaatcgcaagcgagcctcagcgtgttca
ttggcgctcgtggtcgtccagcaaaataaagtggttgacagtttttacacccttattaat
ccgcagatgcagtttgatgcccaaaacattcacattcatggcatcacccctgaaatggtt
caagatcagccaacatttgatcaagtttggccgcatattcaaatgttctatacgccaggt
cggatcgtgaccgctcacaatgcaccgtttgatgtttcggttatgcgactgacactggat
cgttacggcattgcggcaccgcgctatcaagtgattgacacggttaaaacctcgcgacaa
tttttgccgaagttgccgaatcatcggttagatactgtcagtgccgccttgcacattccg
cttgagcatcaccacaatgccttggcggatagttatgcctgcgcacgaattttgatcgcc
gaaaatgagcactttggcgaagcccggattaaaagcatgatgaagctttcaaaagcgggt
tga
DBGET
integrated database retrieval system
