| Entry |
|
|---|
| Name |
(GenBank) ATP-dependent DNA helicase
|
|---|
| KO |
|
|---|
| Organism |
lcx Lacticaseibacillus casei 12A
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lcx00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCA12A_2370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lcx03019]
LCA12A_2370
03400 DNA repair and recombination proteins [BR:lcx03400]
LCA12A_2370
Enzymes [BR:lcx01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCA12A_2370
Messenger RNA biogenesis [BR:lcx03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LCA12A_2370
DNA repair and recombination proteins [BR:lcx03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LCA12A_2370
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
1022785..1024563
|
|---|
| AA seq |
592 aa
MIAPQAETILKEKFGYDHFRAGQNQAISRVLAGESTLVVMPTGGGKSLCYQIPAMLLSGL
TLVVSPLIALMKDQVDALNDNGIPAAFINSILDYQEIADRLDQARSGRIKLLYVAPERFD
TDWFVQRLGSTDISLFAIDEAHCISQWGHDFRPSYLNLANVAAQLPSQPPVIALTATATP
RVAQDICQRLAIPADGMINTGFERSNLSFKVVRDQDEDRYLLDYLKLNVDQAGIIYASTR
KEVDRLYTFLAHKKLPVAKYHAGMSEAQRAANQEDFLFDRKPIMIATNAFGMGIDKSNVR
FVIHAQIPKDVESYYQEAGRAGRDGLPSEAILLFKPQDLQVQRFFIDQSEGDDEHKQRQY
EKLKMMERYANTDQCLQQFILNYFGQNGTKPCGRCSNCLDDRESVDVTVDAQKVLSCVVR
LHERFGKGVVAQVLAGAHNQRVLSFHLDQLSTYGLMSSRRQRDITTFIDFLAAGGYLETR
GGQYPTLGLTAKGAEVLRGQAQVFQKTAQKAEQHLEVDDTVFQELRSTRRQLAEQQHLPP
YMIFSDKTLKAIGSAMPQSLDELMAVKGVGQAKLDKYGQIFLDVLQAIKAKA |
|---|
| NT seq |
1779 nt +upstreamnt +downstreamnt
atgattgcgccgcaagcggagacaattttaaaggaaaaatttggctatgatcattttcgt
gctggtcaaaatcaggccatcagtcgcgttttggctggtgaaagcacgctggttgtgatg
ccaacaggcggcgggaaatcgttgtgttatcagattccagcgatgttgttgtcgggattg
acgctcgttgtgtcgccgctcatcgcgttgatgaaggatcaggtggatgcgttgaacgat
aacgggatcccggcggctttcattaatagtatccttgattatcaagagattgctgatcgt
cttgaccaagcaagaagtggtcggattaaattgttatatgttgccccagaacggtttgac
acggattggtttgtgcaacggcttggcagcaccgatatttcgttatttgcaattgatgaa
gcccattgtatttctcaatggggtcacgattttcggccgagttatttgaatctggcgaat
gtggcggctcaattgccttcgcagccaccggtcattgccttgaccgcaacagctacaccg
cgagttgcgcaggatatttgccagcgactggcgattccggctgacgggatgattaatact
ggttttgagcgaagtaatctgagcttcaaggtcgtacgcgatcaggatgaagatcggtat
ctactagattacctgaaactgaatgtcgatcaggcaggcatcatctatgccagcacccgt
aaagaagttgaccgtttgtatacctttttggcacataagaagttgcctgtggccaaatat
cacgcgggcatgagtgaagcgcagcgtgctgctaatcaggaagactttttgtttgatcgc
aaaccaattatgattgcaacgaatgcgttcggcatgggtattgataaaagcaacgtgcgg
tttgtcattcacgcccagattcccaaagatgtcgaatcgtattatcaagaagccggtcgg
gctggtcgtgatggcttgccgagtgaggcaattttgctgtttaagccgcaagatctccag
gttcagcggttcttcatcgatcaatccgaaggcgatgacgagcacaaacagcggcaatat
gagaagttgaaaatgatggaacggtatgcgaacacagatcagtgtttgcaacagtttatt
ttgaactatttcggtcaaaacgggacaaaaccatgtggtcggtgttcgaattgtttggat
gaccgggaatcagtggatgttacggttgatgcacagaaggtcttatcttgtgtggttcga
ttgcatgaacgttttggcaaaggcgttgtggcacaagtgttggctggggcccacaatcag
cgggtattgtcgtttcatctagatcaattgtcaacttatgggttgatgagcagtcgtcgt
caacgcgacattacaacgttcatagattttctggcggctggcggttatttagaaacccgc
ggtggtcagtacccaactctgggcttaacggccaaaggcgctgaggttcttcgcggacaa
gcgcaagtattccagaaaacggcgcaaaaagccgagcagcatctcgaagtcgacgacact
gtctttcaggaactgcgcagtactcggcgacaactggcggagcagcagcatttaccgcct
tatatgattttctctgataagacgttgaaggcaattggcagcgccatgccgcaaagtctt
gatgagttgatggcagtcaaaggcgtcgggcaggcgaagttggataagtatggccaaatc
tttttggatgtcctgcaggcgattaaggccaaggcttga |
|---|
