Lacticaseibacillus casei 12A: LCA12A_2546
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Entry
LCA12A_2546 CDS
T03665
Name
(GenBank) BglG family transcription antiterminator
KO
K03491
probable licABCH operon transcriptional regulator
Organism
lcx
Lacticaseibacillus casei 12A
Brite
KEGG Orthology (KO) [BR:
lcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcx03000
]
LCA12A_2546
Transcription factors [BR:
lcx03000
]
Prokaryotic type
Other transcription factors
BglG family
LCA12A_2546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_11
PTS_EIIA_2
PRD
HTH_Mga
HTH_DeoR
Mga
HTH_AsnC-type
HTH_20
HTH_24
HTH_PafC
DNApol3-delta_C
Xre-like-HTH
HTH_Crp_2
GntR
MarR_2
Duc1_FFAT_like
Motif
Other DBs
NCBI-ProteinID:
EKQ01836
LinkDB
All DBs
Position
complement(330458..332251)
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AA seq
597 aa
AA seq
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MREQTIINALQTNGPMSAAALAATLGVSRRTLQSDLRQLNEDNTGFIITVTRNVGYQLTI
TDSAQFAAYQASLQDQAQPAMPAKRLPALMHVLLTTTEYLTVAQLAEHELISSKQLQRDL
RELEKLLIGTPLQLERKAHYGIRLQGEWQSRIHALQQRGLPPHHQTLCQRLMPLGLDPAI
TAQFAGEVGWSLAVKGQATVPAPTTAAFAGLLADSRLSEEAWQFLTVSFAAKHKQLTTRL
DHDLLKTKLQAYFTALDMRHKTDFATHPEFLSLMYFHVLALIGRLQKHQSLAGLSLEPLA
RDYPIAFNWAVQFAQWLTREYQIAVPKTEIGYLTTHLLVPLEQAHEAWSRRLYKIAVLCG
TGGGIATLLCLRLRRIFPEAVIQTFGLNELTAIHELEPDLLFTVTELTETFDCPVVRIDE
LASDLDFANLRHELSMAARSNNTDTLVDLLTPALFFQTSQVADYHALLLALTATMTSYCG
QSDYAESVMQRENFLATIYDNGIAIPHPLSFNAEKNAVAVVVLPNGAGGSSRPVKLVWLI
ALKRDQLPLHRTLTTQLAALMQQPDVIEQLVHQTDFTRFINILRTALEGAEQTWIYN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgaacaaaccattatcaacgctttacaaaccaacgggccgatgtccgcagctgct
ttagcagcgacgttgggggtctcgcggcgaacactgcaaagtgatttgcggcaattaaat
gaagacaacaccggttttatcattacggttacccgcaatgtgggttatcagttgaccatc
accgatagtgcgcagtttgctgcttatcaagctagtttgcaagatcaagcacaaccggcc
atgccggcgaaacgattgcctgccttaatgcatgtcttgctgaccacgaccgagtatcta
acggtggcgcagttagccgagcacgagctgatcagttcaaaacagttgcaacgcgattta
cgcgagctggaaaagttgctgattggcacaccactgcaattagaacgtaaggcacattac
ggtatccgacttcaaggcgaatggcaaagtcgcattcatgccttacaacaacggggtttg
ccgccgcatcatcagactttgtgtcagcgtttaatgcccttggggttggatccagcaatc
acggcgcagtttgctggcgaggttggttggtcactggcggtcaaaggccaggcaaccgtg
cctgcgccaacgacagcggcttttgctggcttattagccgatagtcggcttagtgaagaa
gcatggcaatttttgaccgtcagtttcgctgcgaaacacaaacaactcaccacacggctg
gaccacgacctgttgaaaacaaaactgcaagcttatttcaccgctttagatatgcggcac
aaaactgatttcgccacccatcccgaatttttgtcgctcatgtattttcatgtgttggca
ctgatcggacgattgcagaaacatcaaagtttggcagggttaagtctggaaccattggcc
cgtgactacccgattgcgttcaactgggcggtccaatttgcccagtggctgactcgcgaa
tatcaaatagcggtaccaaaaaccgagattggttatttgactactcatctgttagtcccg
ctcgaacaggcacacgaggcttggagtcggcggctgtataagatcgcagttctttgtggc
actggcggcgggattgcgacgttattgtgtttacgattgcgccgcattttccctgaggct
gtgatccagacattcggtcttaatgaactcactgcaattcatgagcttgaaccagattta
ctgttcacggtgactgagttaaccgagacgtttgactgtccagtcgttcggattgatgaa
ttggcatctgatctggattttgccaacctgcgtcacgaactatcaatggcggcacgcagc
aataatactgacacgttggtcgatttactaacaccggcgttatttttccagacaagtcag
gtggcagattatcacgcgttattgctcgcactgaccgccaccatgacttcttattgtggt
cagtcagattatgccgaatcagtgatgcagcgggaaaactttttagcaaccatctatgac
aacggcattgcgattccgcatcccctgtcattcaacgctgaaaagaacgccgttgcggtg
gtggtcttgccaaatggtgctggcggcagttctcgaccggttaagttagtctggttaatc
gcattaaaacgcgatcagctaccgttgcatcgcacactaacaacgcaattagcagcctta
atgcaacagccagatgtcatcgagcaactcgtccaccaaactgatttcacccgattcatt
aacattttacgcacggcactggaaggagcagagcaaacatggatttacaactga
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